RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 OATP04181 439 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 XRCC6P12956 609 aaKnown RBP eCLIP19.85■□□□□ 0.77
SNX27-203ENST00000368843 IGBP1P78318 339 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 CERKLQ49MI3 558 aaPredicted RBP19.85■□□□□ 0.77
SNX27-203ENST00000368843 SMC5Q8IY18 1101 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 ANKRD35Q8N283 1001 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 C17orf53Q8N3J3 647 aaPredicted RBP19.85■□□□□ 0.77
SNX27-203ENST00000368843 HOXB7P09629 217 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 CEP85LQ5SZL2 805 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 DCAF15Q66K64 600 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 RPUSD2Q8IZ73 545 aaKnown RBP19.85■□□□□ 0.77
SNX27-203ENST00000368843 PTPRKQ15262 1439 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 TTC36A6NLP5 189 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 MAN1A1P33908 653 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 FANCCQ00597 558 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 ZNF496Q96IT1 587 aaPredicted RBP19.85■□□□□ 0.77
SNX27-203ENST00000368843 ERVV-2B6SEH9 535 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 LIG4P49917 911 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 KRT81Q14533 505 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 STMN2Q93045 179 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 ZKSCAN5Q9Y2L8 839 aa19.85■□□□□ 0.77
SNX27-203ENST00000368843 E7EWF7 191 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 ATP2B4P23634 1241 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 YWHAEP62258 255 aaKnown RBP19.84■□□□□ 0.77
SNX27-203ENST00000368843 SFMBT2Q5VUG0 894 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 KRT40Q6A162 431 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 PCDHB13Q9Y5F0 798 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 NEURL1BA8MQ27 555 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 ARFGAP2Q8N6H7 521 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 KDM3AQ9Y4C1 1321 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 SPDYE16A6NNV3 312 aaPredicted RBP19.84■□□□□ 0.77
SNX27-203ENST00000368843 NLRP12P59046 1061 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 SPDYE2Q495Y8 402 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 SRGAP1Q7Z6B7 1085 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 SDR42E1Q8WUS8 393 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 POLR2MP0CAP2 368 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 SATB1Q01826 763 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 KLHL30Q0D2K2 578 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 PTPROQ16827 1216 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 GPBP1Q86WP2 473 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 KLHL7Q8IXQ5 586 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 ATP10AO60312 1499 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 CEP104O60308 925 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 ZBTB8OSQ8IWT0 167 aa19.84■□□□□ 0.77
SNX27-203ENST00000368843 U2AF2P26368 475 aaKnown RBP eCLIP19.83■□□□□ 0.773e-9■■■■■ 28.8
SNX27-203ENST00000368843 TECP42680 631 aa19.83■□□□□ 0.77
SNX27-203ENST00000368843 PABPC4Q13310 644 aaKnown RBP eCLIP19.83■□□□□ 0.77
SNX27-203ENST00000368843 FAM173BQ6P4H8 233 aa19.83■□□□□ 0.77
SNX27-203ENST00000368843 PSTPIP2Q9H939 334 aa19.83■□□□□ 0.77
SNX27-203ENST00000368843 EBAG9O00559 213 aa19.83■□□□□ 0.77
SNX27-203ENST00000368843 ITKQ08881 620 aa19.83■□□□□ 0.77
SNX27-203ENST00000368843 NBPF3Q9H094 633 aa19.83■□□□□ 0.77
SNX27-203ENST00000368843 TACC3Q9Y6A5 838 aa19.83■□□□□ 0.77
SNX27-203ENST00000368843 AOX1Q06278 1338 aa19.83■□□□□ 0.77
SNX27-203ENST00000368843 CSPG5O95196 566 aa19.83■□□□□ 0.77
SNX27-203ENST00000368843 SCYL2Q6P3W7 929 aa19.83■□□□□ 0.77
SNX27-203ENST00000368843 FLAD1Q8NFF5 587 aa19.83■□□□□ 0.77
SNX27-203ENST00000368843 LSM14BQ9BX40 385 aaKnown RBP19.83■□□□□ 0.77
SNX27-203ENST00000368843 CACYBPQ9HB71 228 aaKnown RBP19.83■□□□□ 0.76
SNX27-203ENST00000368843 USP17L12C9JPN9 530 aa19.83■□□□□ 0.76
SNX27-203ENST00000368843 USP17L21D6R901 530 aa19.83■□□□□ 0.76
SNX27-203ENST00000368843 BCAMP50895 628 aa19.83■□□□□ 0.76
SNX27-203ENST00000368843 GKAP1Q5VSY0 366 aaPredicted RBP19.83■□□□□ 0.76
SNX27-203ENST00000368843 CAPN9O14815 690 aa19.83■□□□□ 0.76
SNX27-203ENST00000368843 EVCP57679 992 aa19.83■□□□□ 0.76
SNX27-203ENST00000368843 ZSCAN10Q96SZ4 725 aaPredicted RBP19.83■□□□□ 0.76
SNX27-203ENST00000368843 XKR9Q5GH70 373 aa19.82■□□□□ 0.76
SNX27-203ENST00000368843 BTDP43251 543 aa19.82■□□□□ 0.76
SNX27-203ENST00000368843 RIOK3O14730 519 aaKnown RBP19.82■□□□□ 0.76
SNX27-203ENST00000368843 MRPL11Q9Y3B7 192 aaKnown RBP19.82■□□□□ 0.76
SNX27-203ENST00000368843 TBC1D8O95759 1140 aa19.82■□□□□ 0.76
SNX27-203ENST00000368843 CCDC105Q8IYK2 499 aa19.82■□□□□ 0.76
SNX27-203ENST00000368843 SUGCTQ9HAC7 445 aa19.82■□□□□ 0.76
SNX27-203ENST00000368843 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
SNX27-203ENST00000368843 K7ENM7 598 aa19.82■□□□□ 0.76
SNX27-203ENST00000368843 TNNC2P02585 160 aa19.82■□□□□ 0.76
SNX27-203ENST00000368843 NT5C3AQ9H0P0 336 aa19.82■□□□□ 0.76
SNX27-203ENST00000368843 SEPT10Q9P0V9 454 aa19.82■□□□□ 0.76
SNX27-203ENST00000368843 THRAP3Q9Y2W1 955 aaKnown RBP19.82■□□□□ 0.76
SNX27-203ENST00000368843 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.82■□□□□ 0.76
SNX27-203ENST00000368843 FLOT1O75955 427 aa19.82■□□□□ 0.76
SNX27-203ENST00000368843 SEC24BO95487 1268 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 PPP2R5BQ15173 497 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 KRBA2Q6ZNG9 492 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 SLC12A2P55011 1212 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 MLKLQ8NB16 471 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 ATP8A2Q9NTI2 1148 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 SYCE1Q8N0S2 351 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 JAK2O60674 1132 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 SND1Q7KZF4 910 aaKnown RBP eCLIP19.81■□□□□ 0.76
SNX27-203ENST00000368843 CDC37L1Q7L3B6 337 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 TAOK1Q7L7X3 1001 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 GOLGA8HP0CJ92 632 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 PNOCQ13519 176 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 TYW1BQ6NUM6 668 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 C4orf50Q6ZRC1 276 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 IFT20Q8IY31 132 aa19.81■□□□□ 0.76
SNX27-203ENST00000368843 EIF4A1P60842 406 aaKnown RBP19.8■□□□□ 0.76
SNX27-203ENST00000368843 ZNF654Q8IZM8 581 aa19.8■□□□□ 0.76
SNX27-203ENST00000368843 PPEF1O14829 653 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms