RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 A0A1W2PRG0 241 aa17.48■□□□□ 0.39
SF3B5-201ENST00000367569 SGPL1O95470 568 aa17.48■□□□□ 0.39
SF3B5-201ENST00000367569 RASA1P20936 1047 aa17.48■□□□□ 0.39
SF3B5-201ENST00000367569 PPARAQ07869 468 aa17.48■□□□□ 0.39
SF3B5-201ENST00000367569 MCMDC2Q4G0Z9 681 aa17.48■□□□□ 0.39
SF3B5-201ENST00000367569 SBK1Q52WX2 424 aa17.48■□□□□ 0.39
SF3B5-201ENST00000367569 DPF3Q92784 378 aa17.48■□□□□ 0.39
SF3B5-201ENST00000367569 P2RX7Q99572 595 aaKnown RBP17.48■□□□□ 0.39
SF3B5-201ENST00000367569 NACAP1Q9BZK3 213 aa17.48■□□□□ 0.39
SF3B5-201ENST00000367569 INCENPQ9NQS7 918 aa17.48■□□□□ 0.39
SF3B5-201ENST00000367569 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
SF3B5-201ENST00000367569 HOXA7P31268 230 aaPredicted RBP17.47■□□□□ 0.39
SF3B5-201ENST00000367569 HAND2P61296 217 aa17.47■□□□□ 0.39
SF3B5-201ENST00000367569 ICA1Q05084 483 aa17.47■□□□□ 0.39
SF3B5-201ENST00000367569 GIMAP6Q6P9H5 292 aa17.47■□□□□ 0.39
SF3B5-201ENST00000367569 TMEM179Q6ZVK1 233 aa17.47■□□□□ 0.39
SF3B5-201ENST00000367569 CENPQQ7L2Z9 268 aaPredicted RBP17.47■□□□□ 0.39
SF3B5-201ENST00000367569 CCDC136Q96JN2 1154 aa17.47■□□□□ 0.39
SF3B5-201ENST00000367569 MKNK2Q9HBH9 465 aa17.47■□□□□ 0.39
SF3B5-201ENST00000367569 MORF4L1Q9UBU8 362 aa17.47■□□□□ 0.39
SF3B5-201ENST00000367569 GJD2Q9UKL4 321 aa17.47■□□□□ 0.39
SF3B5-201ENST00000367569 TACC3Q9Y6A5 838 aa17.47■□□□□ 0.39
SF3B5-201ENST00000367569 COL11A1P12107 1806 aaPredicted RBP17.47■□□□□ 0.39
SF3B5-201ENST00000367569 A0A0G2JMZ2 1700 aa17.47■□□□□ 0.39
SF3B5-201ENST00000367569 C19orf81C9J6K1 198 aa17.46■□□□□ 0.39
SF3B5-201ENST00000367569 RAD21O60216 631 aa17.46■□□□□ 0.39
SF3B5-201ENST00000367569 KIAA1755Q5JYT7 1200 aa17.46■□□□□ 0.39
SF3B5-201ENST00000367569 DEFB118Q96PH6 123 aa17.46■□□□□ 0.39
SF3B5-201ENST00000367569 GINM1Q9NU53 330 aa17.46■□□□□ 0.39
SF3B5-201ENST00000367569 RLFQ13129 1914 aa17.45■□□□□ 0.38
SF3B5-201ENST00000367569 PLXNB2O15031 1838 aa17.45■□□□□ 0.38
SF3B5-201ENST00000367569 FARP2O94887 1054 aaPredicted RBP17.45■□□□□ 0.38
SF3B5-201ENST00000367569 HSPD1P10809 573 aaKnown RBP17.45■□□□□ 0.38
SF3B5-201ENST00000367569 VCAM1P19320 739 aa17.45■□□□□ 0.38
SF3B5-201ENST00000367569 FXR1P51114 621 aaKnown RBP eCLIP17.45■□□□□ 0.38
SF3B5-201ENST00000367569 IRX3P78415 501 aaPredicted RBP17.45■□□□□ 0.38
SF3B5-201ENST00000367569 FAM47AQ5JRC9 791 aa17.45■□□□□ 0.38
SF3B5-201ENST00000367569 USP17L2Q6R6M4 530 aa17.45■□□□□ 0.38
SF3B5-201ENST00000367569 SAMD1Q6SPF0 538 aaPredicted RBP17.45■□□□□ 0.38
SF3B5-201ENST00000367569 SPICE1Q8N0Z3 855 aa17.45■□□□□ 0.38
SF3B5-201ENST00000367569 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.45■□□□□ 0.38
SF3B5-201ENST00000367569 TXNRD2Q9NNW7 524 aa17.45■□□□□ 0.38
SF3B5-201ENST00000367569 PAK6Q9NQU5 681 aaPredicted RBP17.45■□□□□ 0.38
SF3B5-201ENST00000367569 TFRCP02786 760 aaKnown RBP17.44■□□□□ 0.38
SF3B5-201ENST00000367569 EEF2P13639 858 aaKnown RBP17.44■□□□□ 0.38
SF3B5-201ENST00000367569 HERVK_113P62684 666 aa17.44■□□□□ 0.38
SF3B5-201ENST00000367569 CHMP4CQ96CF2 233 aa17.44■□□□□ 0.38
SF3B5-201ENST00000367569 HTATIP2Q9BUP3 242 aa17.44■□□□□ 0.38
SF3B5-201ENST00000367569 RANBP2P49792 3224 aaKnown RBP17.43■□□□□ 0.38
SF3B5-201ENST00000367569 TRIM32Q13049 653 aa17.43■□□□□ 0.38
SF3B5-201ENST00000367569 POTEEQ6S8J3 1075 aa17.43■□□□□ 0.38
SF3B5-201ENST00000367569 SIAH1Q8IUQ4 282 aa17.43■□□□□ 0.38
SF3B5-201ENST00000367569 PAGR1Q9BTK6 254 aa17.43■□□□□ 0.38
SF3B5-201ENST00000367569 KIAA1683Q9H0B3 1180 aa17.43■□□□□ 0.38
SF3B5-201ENST00000367569 CRISPLD2Q9H0B8 497 aa17.43■□□□□ 0.38
SF3B5-201ENST00000367569 RPAP3Q9H6T3 665 aaPredicted RBP17.43■□□□□ 0.38
SF3B5-201ENST00000367569 ARHGEF10LQ9HCE6 1279 aa17.43■□□□□ 0.38
SF3B5-201ENST00000367569 TOMM22Q9NS69 142 aa17.43■□□□□ 0.38
SF3B5-201ENST00000367569 RBPJLQ9UBG7 517 aa17.43■□□□□ 0.38
SF3B5-201ENST00000367569 FGAP02671 866 aa17.42■□□□□ 0.38
SF3B5-201ENST00000367569 HMGCRP04035 888 aa17.42■□□□□ 0.38
SF3B5-201ENST00000367569 Q3C1V9 767 aa17.42■□□□□ 0.38
SF3B5-201ENST00000367569 RRP12Q5JTH9 1297 aaKnown RBP17.42■□□□□ 0.38
SF3B5-201ENST00000367569 CHRDL2Q6WN34 429 aa17.42■□□□□ 0.38
SF3B5-201ENST00000367569 TBC1D10CQ8IV04 446 aa17.42■□□□□ 0.38
SF3B5-201ENST00000367569 LRRC47Q8N1G4 583 aaKnown RBP17.42■□□□□ 0.38
SF3B5-201ENST00000367569 GPRC5AQ8NFJ5 357 aa17.42■□□□□ 0.38
SF3B5-201ENST00000367569 CCDC17Q96LX7 622 aa17.42■□□□□ 0.38
SF3B5-201ENST00000367569 TANGO6Q9C0B7 1094 aa17.42■□□□□ 0.38
SF3B5-201ENST00000367569 NBPF3Q9H094 633 aa17.42■□□□□ 0.38
SF3B5-201ENST00000367569 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.42■□□□□ 0.38
SF3B5-201ENST00000367569 SZT2Q5T011 3432 aa17.42■□□□□ 0.38
SF3B5-201ENST00000367569 NMT2O60551 498 aa17.41■□□□□ 0.38
SF3B5-201ENST00000367569 CYP2B6P20813 491 aa17.41■□□□□ 0.38
SF3B5-201ENST00000367569 USP14P54578 494 aa17.41■□□□□ 0.38
SF3B5-201ENST00000367569 C12orf42Q96LP6 360 aa17.41■□□□□ 0.38
SF3B5-201ENST00000367569 NUP88Q99567 741 aaPredicted RBP17.41■□□□□ 0.38
SF3B5-201ENST00000367569 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.41■□□□□ 0.38
SF3B5-201ENST00000367569 HIP1O00291 1037 aa17.4■□□□□ 0.38
SF3B5-201ENST00000367569 SLC3A2P08195 630 aaKnown RBP17.4■□□□□ 0.38
SF3B5-201ENST00000367569 TSPY3P0CV98 308 aa17.4■□□□□ 0.38
SF3B5-201ENST00000367569 TSPY8P0CW00 308 aa17.4■□□□□ 0.38
SF3B5-201ENST00000367569 CHMLP26374 656 aa17.4■□□□□ 0.38
SF3B5-201ENST00000367569 PDE4BQ07343 736 aa17.4■□□□□ 0.38
SF3B5-201ENST00000367569 RASGRP2Q7LDG7 609 aa17.4■□□□□ 0.38
SF3B5-201ENST00000367569 ZNF444Q8N0Y2 327 aaPredicted RBP17.4■□□□□ 0.38
SF3B5-201ENST00000367569 TRIB2Q92519 343 aa17.4■□□□□ 0.38
SF3B5-201ENST00000367569 CEP95Q96GE4 821 aa17.4■□□□□ 0.38
SF3B5-201ENST00000367569 PAWRQ96IZ0 340 aaKnown RBP17.4■□□□□ 0.38
SF3B5-201ENST00000367569 PORCNQ9H237 461 aa17.4■□□□□ 0.38
SF3B5-201ENST00000367569 NEDD4P46934 1319 aa17.4■□□□□ 0.38
SF3B5-201ENST00000367569 RANBP6O60518 1105 aaKnown RBP17.39■□□□□ 0.37
SF3B5-201ENST00000367569 CAPN2P17655 700 aa17.39■□□□□ 0.37
SF3B5-201ENST00000367569 ERVK-9P63128 1117 aa17.39■□□□□ 0.37
SF3B5-201ENST00000367569 ERVK-24P63145 666 aa17.39■□□□□ 0.37
SF3B5-201ENST00000367569 TFAP4Q01664 338 aa17.39■□□□□ 0.37
SF3B5-201ENST00000367569 DIS3LQ8TF46 1054 aaKnown RBP17.39■□□□□ 0.37
SF3B5-201ENST00000367569 VCPKMTQ9H867 229 aa17.39■□□□□ 0.37
SF3B5-201ENST00000367569 KANSL2Q9H9L4 492 aa17.39■□□□□ 0.37
SF3B5-201ENST00000367569 RBM27Q9P2N5 1060 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms