RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 AOX1Q06278 1338 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 KRT15P19012 456 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 SULF1Q8IWU6 871 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 HAUS1Q96CS2 278 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 PARP2Q9UGN5 583 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 UHRF1BP1Q6BDS2 1440 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 KCNA6P17658 529 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 MTMR3Q13615 1198 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 NELFBQ8WX92 580 aa17.35■□□□□ 0.37
NUCKS1-201ENST00000367142 XRCC6P12956 609 aaKnown RBP eCLIP17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 HADHQ16836 314 aaKnown RBP17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 BCAP29Q9UHQ4 241 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 POLR2MP0CAP2 368 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 EVCP57679 992 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 RAD51AP2Q09MP3 1159 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 GCKRQ14397 625 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 RPS6KA2Q15349 733 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 GTF2IP78347 998 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 ARHGAP44Q17R89 818 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 MMS19Q96T76 1030 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 TBC1D8O95759 1140 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 ALAS1P13196 640 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 MAGEA1P43355 309 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 NCAPG2Q86XI2 1143 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 MIPOL1Q8TD10 442 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 ZNF532Q9HCE3 1301 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 TMOD1P28289 359 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 RPS6KA1Q15418 735 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 KRT24Q2M2I5 525 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 SH2D4BQ5SQS7 431 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 FAM160B1Q5W0V3 765 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 PEX26Q7Z412 305 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 SBNO1A3KN83 1393 aa17.34■□□□□ 0.37
NUCKS1-201ENST00000367142 NAA25Q14CX7 972 aa17.33■□□□□ 0.37
NUCKS1-201ENST00000367142 TMTC1Q8IUR5 882 aa17.33■□□□□ 0.37
NUCKS1-201ENST00000367142 ANKFY1Q9P2R3 1169 aa17.33■□□□□ 0.37
NUCKS1-201ENST00000367142 PRKAG2Q9UGJ0 569 aa17.33■□□□□ 0.37
NUCKS1-201ENST00000367142 N4BP1O75113 896 aaKnown RBP17.33■□□□□ 0.37
NUCKS1-201ENST00000367142 TTC31Q49AM3 519 aaPredicted RBP17.33■□□□□ 0.37
NUCKS1-201ENST00000367142 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.33■□□□□ 0.37
NUCKS1-201ENST00000367142 GOLGA5Q8TBA6 731 aa17.33■□□□□ 0.37
NUCKS1-201ENST00000367142 ARHGEF2Q92974 986 aaKnown RBP17.33■□□□□ 0.37
NUCKS1-201ENST00000367142 MAP3K19Q56UN5 1328 aa17.33■□□□□ 0.37
NUCKS1-201ENST00000367142 EIF2AK4Q9P2K8 1649 aaKnown RBP17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 HESX1Q9UBX0 185 aa17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 LMNTD2Q8IXW0 634 aa17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 SMCO2A6NFE2 343 aa17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 A6NNZ2 444 aa17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 TUBB8Q3ZCM7 444 aa17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 SCYL2Q6P3W7 929 aa17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 CCDC84Q86UT8 332 aaPredicted RBP17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 C2CD5Q86YS7 1000 aa17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 KLHL7Q8IXQ5 586 aa17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 ANKRD35Q8N283 1001 aa17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 TRIM56Q9BRZ2 755 aaKnown RBP17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 TAB2Q9NYJ8 693 aa17.33■□□□□ 0.36
NUCKS1-201ENST00000367142 NLRP12P59046 1061 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 MFSD14BQ5SR56 506 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 CCDC24Q8N4L8 307 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 UIMC1Q96RL1 719 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 LRMPQ12912 555 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 USP26Q9BXU7 913 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 ATP2B4P23634 1241 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 FANCCQ00597 558 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 IFRD2Q12894 506 aaPredicted RBP17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 VSIG1Q86XK7 387 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 PALM2Q8IXS6 379 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 SLFN12Q8IYM2 578 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 NRBP2Q9NSY0 501 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 TYW5A2RUC4 315 aaKnown RBP17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 POLR2BP30876 1174 aaKnown RBP17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 PPARAQ07869 468 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 PAK2Q13177 524 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 SMC5Q8IY18 1101 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 CCDC68Q9H2F9 335 aa17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 IPO11Q9UI26 975 aaKnown RBP17.32■□□□□ 0.36
NUCKS1-201ENST00000367142 KRT3P12035 628 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 PHBP35232 272 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 XKR9Q5GH70 373 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 PPP4R1Q8TF05 950 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 GRK7Q8WTQ7 553 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 POSTNQ15063 836 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 CFAP221Q4G0U5 840 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 C4orf50Q6ZRC1 276 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 SESTD1Q86VW0 696 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 C10orf67Q8IYJ2 551 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 KBTBD3Q8NAB2 608 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 CSRNP1Q96S65 589 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 TEKT3Q9BXF9 490 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 USH1CQ9Y6N9 552 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 MAP3K1Q13233 1512 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 TCP10L2B9ZVM9 353 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 DIXDC1Q155Q3 683 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 RPS6KC1Q96S38 1066 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 FAM47AQ5JRC9 791 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 GPBP1Q86WP2 473 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 NCOA5Q9HCD5 579 aaKnown RBP17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 C1orf112Q9NSG2 853 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 A1BGP04217 495 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 MYL10Q9BUA6 226 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms