RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 PPARAQ07869 468 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 METTL14Q9HCE5 456 aaKnown RBP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 HSPD1P10809 573 aaKnown RBP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 TNFAIP3P21580 790 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 ETF1P62495 437 aaKnown RBP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 UBLCP1Q8WVY7 318 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 RABGGTAQ92696 567 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 USP32Q8NFA0 1604 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 TCP1P17987 556 aaKnown RBP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 SH3BGRP55822 239 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 MIS12Q9H081 205 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 ABCA9Q8IUA7 1624 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 LGSNQ5TDP6 509 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 XRCC5P13010 732 aaKnown RBP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 ATP11AP98196 1134 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 RPS6KA1Q15418 735 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 XPO4Q9C0E2 1151 aaKnown RBP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 CPA1P15085 419 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 PFKFB1P16118 471 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 IQGAP1P46940 1657 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 CARMIL3Q8ND23 1372 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 UFL1O94874 794 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 MXRA7P84157 204 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 INTS8Q75QN2 995 aaKnown RBP13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 PDE6AP16499 860 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 SEMA3FQ13275 785 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 FAM81BQ96LP2 452 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 SNX29Q8TEQ0 813 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 LRRC8AQ8IWT6 810 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 VPS16Q9H269 839 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 USH1CQ9Y6N9 552 aa13.34□□□□□ -0.27
CDC42BPA-203ENST00000366766 KRBA2Q6ZNG9 492 aa13.33□□□□□ -0.27
CDC42BPA-203ENST00000366766 HELBQ8NG08 1087 aaPredicted RBP13.33□□□□□ -0.27
CDC42BPA-203ENST00000366766 BTG4Q9NY30 223 aa13.33□□□□□ -0.27
CDC42BPA-203ENST00000366766 GADD45BO75293 160 aaPredicted RBP13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 NR1I2O75469 434 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 PHKG2P15735 406 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 RXRAP19793 462 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 ALDH1B1P30837 517 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 AFAP1L2Q8N4X5 818 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 SELENOSQ9BQE4 189 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 LGR6Q9HBX8 967 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 ANAPC4Q9UJX5 808 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 WDR19Q8NEZ3 1342 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 ELF2Q15723 593 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 FANCBQ8NB91 859 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 ABCC12Q96J65 1359 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 A0A0D9SFI3 127 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 KCNJ18B7U540 433 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 KCNJ12Q14500 433 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 SPATA1Q5VX52 437 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 KRT26Q7Z3Y9 468 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 P3H4Q92791 437 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 STRN3Q13033 797 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 HERC4Q5GLZ8 1057 aaPredicted RBP13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 ZMYM1Q5SVZ6 1142 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 PEX26Q7Z412 305 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 MICALL1Q8N3F8 863 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 BLIDQ8IZY5 108 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 SLC39A14Q15043 492 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 DENND2CQ68D51 928 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 PAIP2Q9BPZ3 127 aaKnown RBP13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 PCDHB13Q9Y5F0 798 aa13.33□□□□□ -0.28
CDC42BPA-203ENST00000366766 MAGEA1P43355 309 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 KLHL30Q0D2K2 578 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 EAF2Q96CJ1 260 aaPredicted RBP13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 RNF14Q9UBS8 474 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 PHLPP2Q6ZVD8 1323 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 RCAN1P53805 252 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 PPFIBP2Q8ND30 876 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 BACH1O14867 736 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 IL17REQ8NFR9 667 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 MAN1A1P33908 653 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 TNFAIP1Q13829 316 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 BRDTQ58F21 947 aaPredicted RBP13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 STMN2Q93045 179 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 PHKBQ93100 1093 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 PICK1Q9NRD5 415 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 SCG2P13521 617 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 VIRMAQ69YN4 1812 aaKnown RBP13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 MAP7D1Q3KQU3 841 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 SEPT2Q15019 361 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 FLAD1Q8NFF5 587 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 CFAP57Q96MR6 1250 aa13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 CCNL1Q9UK58 526 aaPredicted RBP13.32□□□□□ -0.28
CDC42BPA-203ENST00000366766 C10orf76Q5T2E6 689 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 P4HA1P13674 534 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 INPP5BP32019 993 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 MTA3Q9BTC8 594 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 MORC3Q14149 939 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 RAB3IL1Q8TBN0 382 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 MRPL44Q9H9J2 332 aaKnown RBP13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 JAK2O60674 1132 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 CIB2O75838 187 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 UTP14CQ5TAP6 766 aaKnown RBP13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 TPCN1Q9ULQ1 816 aa13.31□□□□□ -0.28
CDC42BPA-203ENST00000366766 STAT1P42224 750 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms