RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 LRRC3Q9BY71 257 aa3.12□□□□□ -1.91
RNU4-41P-201ENST00000364426 EPB41L4BQ9H329 900 aa3.12□□□□□ -1.91
RNU4-41P-201ENST00000364426 DUSP13Q9UII6 198 aa3.12□□□□□ -1.91
RNU4-41P-201ENST00000364426 FITM1A5D6W6 292 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 KRTAP9-7A8MTY7 169 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 SORBS3O60504 671 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 PEX10O60683 326 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 HTR3BO95264 441 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 PF4P02776 101 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 TMEM253P0C7T8 217 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 GARTP22102 1010 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 HK2P52789 917 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 ERVFC1P60507 584 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 TEKQ02763 1124 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 CHRNEQ04844 493 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 SNX17Q15036 470 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 REC114Q7Z4M0 266 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 RELL1Q8IUW5 271 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 OXR1Q8N573 874 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 KREMEN1Q96MU8 473 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 DIRC2Q96SL1 478 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 SLC6A17Q9H1V8 727 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 CWC22Q9HCG8 908 aaKnown RBP3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 DCP1AQ9NPI6 582 aaPredicted RBP3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 REV1Q9UBZ9 1251 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 POLR3KQ9Y2Y1 108 aaPredicted RBP3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 ROBO2Q9HCK4 1378 aa3.11□□□□□ -1.91
RNU4-41P-201ENST00000364426 CHURC1-FNTBB4DL54 471 aa3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 ETV2O00321 342 aaPredicted RBP3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 ATE1O95260 518 aa3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 ZSCAN22P10073 491 aaPredicted RBP3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 LTKP29376 864 aa3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 KCNA10Q16322 511 aa3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 FAM196AQ6ZSG2 479 aa3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 ERMP1Q7Z2K6 904 aa3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 SPPL2CQ8IUH8 684 aa3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 ANKS4BQ8N8V4 417 aa3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 LINC01599Q8WXQ3 324 aa3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 G6PC3Q9BUM1 346 aa3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 RNF32Q9H0A6 362 aa3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 YBX2Q9Y2T7 364 aaKnown RBP3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 PCDHA11Q9Y5I1 949 aa3.1□□□□□ -1.91
RNU4-41P-201ENST00000364426 TCAF2A6NFQ2 919 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 NPIPB6E9PJ23 425 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 HRKO00198 91 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 RGS13O14921 159 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 DNAJA2O60884 412 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 LRRN2O75325 713 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 SEMA7AO75326 666 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 GBP2P32456 591 aaPredicted RBP3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 RNF4P78317 190 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 DUSP4Q13115 394 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 TIGD5Q53EQ6 642 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 RNF111Q6ZNA4 994 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 ATG14Q6ZNE5 492 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 TTLL10Q6ZVT0 673 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 GOLM1Q8NBJ4 401 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 DAGLBQ8NCG7 672 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 BAHD1Q8TBE0 780 aaPredicted RBP3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 SYTL5Q8TDW5 730 aaPredicted RBP3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 SHISA4Q96DD7 197 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 FAM161BQ96MY7 647 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 HDAC8Q9BY41 377 aa3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 SMG5Q9UPR3 1016 aaKnown RBP3.09□□□□□ -1.91
RNU4-41P-201ENST00000364426 CUX2O14529 1486 aa3.09□□□□□ -1.92
RNU4-41P-201ENST00000364426 TEX51A0A1B0GUA7 166 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 SHISA3A0PJX4 238 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 SLC22A31A6NKX4 558 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 NOTOA8MTQ0 251 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 GREM1O60565 184 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 UBOX5O94941 541 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 TRHRP34981 398 aaPredicted RBP3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 CCNFP41002 786 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 TNNI2P48788 182 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 LINC00310P59036 64 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 RAD51AP2Q09MP3 1159 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 MLECQ14165 292 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 CWF19L2Q2TBE0 894 aaKnown RBP3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 SNAP47Q5SQN1 464 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 CDCP2Q5VXM1 449 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 KCNN1Q92952 543 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 SYTL4Q96C24 671 aaPredicted RBP3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 INTS4Q96HW7 963 aaKnown RBP3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 KIF2CQ99661 725 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 MCOLN1Q9GZU1 580 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 C19orf44Q9H6X5 657 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 ZNF552Q9H707 407 aaPredicted RBP3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 EHMT1Q9H9B1 1298 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 KCNK12Q9HB15 430 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 MRS2Q9HD23 443 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 GMIPQ9P107 970 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 VTI1BQ9UEU0 232 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 EBF1Q9UH73 591 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 KLHL3Q9UH77 587 aa3.08□□□□□ -1.92
RNU4-41P-201ENST00000364426 MYOCOSA0A1B0GUC4 107 aa3.07□□□□□ -1.92
RNU4-41P-201ENST00000364426 F6X3S4 739 aa3.07□□□□□ -1.92
RNU4-41P-201ENST00000364426 GRIN3BO60391 1043 aa3.07□□□□□ -1.92
RNU4-41P-201ENST00000364426 PDIA4P13667 645 aaKnown RBP3.07□□□□□ -1.92
RNU4-41P-201ENST00000364426 GBP1P32455 592 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms