RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 GRM2Q14416 872 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 GRM7Q14831 915 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 CDC37L1Q7L3B6 337 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 LDLRAD3Q86YD5 345 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 LINC01599Q8WXQ3 324 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 WASF1Q92558 559 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 ZNF503Q96F45 646 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 TCF12Q99081 682 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 MIPEPQ99797 713 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 PCDHA11Q9Y5I1 949 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 DMRT1Q9Y5R6 373 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 CSADQ9Y600 493 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 SALL3Q9BXA9 1300 aa1.31□□□□□ -2.2
RNU6-340P-201ENST00000364005 PHACTR2O75167 634 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 RPLP1P05386 114 aaKnown RBP1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 BMP5P22003 454 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 LTKP29376 864 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 KIR3DL1P43629 444 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 SARSP49591 514 aaKnown RBP1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 ZNF157P51786 506 aaPredicted RBP1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 DAB2P98082 770 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 C8orf34Q49A92 452 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 MICALCLQ6ZW33 695 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 LGI4Q8N135 537 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 DNERQ8NFT8 737 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 SPATA3Q8NHX4 192 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 KCNB2Q92953 911 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 WWC2-AS2Q96NR7 200 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 CSRNP2Q9H175 543 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 SEMA4AQ9H3S1 761 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 ZNF576Q9H609 170 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 LIN7BQ9HAP6 207 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 PICK1Q9NRD5 415 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 ADARB2Q9NS39 739 aaKnown RBP1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 PPP4R1LQ9P1A2 415 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 TCAF1Q9Y4C2 921 aa1.3□□□□□ -2.2
RNU6-340P-201ENST00000364005 MASP2O00187 686 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 GPR42O15529 346 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 NRDCO43847 1150 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 KRT10P13645 584 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 ATF2P15336 505 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 RFX1P22670 979 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 CYP7A1P22680 504 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 SELENOPP49908 381 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 ZNF200P98182 395 aaPredicted RBP1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 TMEM62Q0P6H9 643 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 RAB3GAP1Q15042 981 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 TARBP2Q15633 366 aaKnown RBP1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 SLC14A2Q15849 920 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 ZNF746Q6NUN9 644 aaPredicted RBP1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 LETMD1Q6P1Q0 360 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 PCSK4Q6UW60 755 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 MRGPRGQ86SM5 289 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 TSPYL5Q86VY4 417 aaPredicted RBP1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 ATCAYQ86WG3 371 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 ANKMY2Q8IV38 441 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 TTC16Q8NEE8 873 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 UCN2Q96RP3 112 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 G6PC3Q9BUM1 346 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 TRIT1Q9H3H1 467 aaKnown RBP1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 GPATCH2Q9NW75 528 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 STIM2Q9P246 746 aa1.29□□□□□ -2.2
RNU6-340P-201ENST00000364005 NPEPPSL1A6NEC2 478 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 NUDT19A8MXV4 375 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 FANCGO15287 622 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 TNFRSF21O75509 655 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 USP2O75604 605 aaPredicted RBP1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 POLR3DP05423 398 aaPredicted RBP1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 CDK4P11802 303 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 C21orf58P58505 322 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 KIAA2012Q0VF49 1180 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 NAA30Q147X3 362 aaPredicted RBP1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 LSM12Q3MHD2 195 aaKnown RBP1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 NRN1LQ496H8 165 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 COLEC12Q5KU26 742 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 ZBTB37Q5TC79 503 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 RNF207Q6ZRF8 634 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 PDZD3Q86UT5 571 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 C12orf40Q86WS4 652 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 KCT2Q8NC54 265 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 ADAMTS17Q8TE56 1095 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 EDEM1Q92611 657 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 COX4I2Q96KJ9 171 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 AMOTL2Q9Y2J4 779 aa1.28□□□□□ -2.2
RNU6-340P-201ENST00000364005 DCDC2CA8MYV0 355 aa1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 LAMTOR5O43504 91 aa1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 PCSK2P16519 638 aa1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 ITPKAP23677 461 aa1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 DGCR2P98153 550 aa1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 TEKQ02763 1124 aa1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 PTH1RQ03431 593 aa1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 COL10A1Q03692 680 aa1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 DNM1Q05193 864 aaKnown RBP1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 RING1Q06587 406 aa1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 SLBPQ14493 270 aaKnown RBP eCLIP1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 CBX2Q14781 532 aaPredicted RBP1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 KIR3DS1Q14943 382 aa1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 RGL3Q3MIN7 710 aa1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 ATG9BQ674R7 924 aa1.27□□□□□ -2.21
RNU6-340P-201ENST00000364005 BORAQ6PGQ7 559 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms