RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 CEP135Q66GS9 1140 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.42□□□□□ -0.74
CALD1-202ENST00000361901 IGDCC4Q8TDY8 1250 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 CNKSR1Q969H4 720 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 CEP131Q9UPN4 1083 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.42□□□□□ -0.74
CALD1-202ENST00000361901 VWA3AA6NCI4 1184 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 CLEC10AQ8IUN9 316 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 DHX58Q96C10 678 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 USP54Q70EL1 1684 aa10.42□□□□□ -0.74
CALD1-202ENST00000361901 POLRMTO00411 1230 aaKnown RBP10.41□□□□□ -0.74
CALD1-202ENST00000361901 PARP1P09874 1014 aaKnown RBP10.41□□□□□ -0.74
CALD1-202ENST00000361901 FDPSP14324 419 aaKnown RBP10.41□□□□□ -0.74
CALD1-202ENST00000361901 TXLNAP40222 546 aa10.41□□□□□ -0.74
CALD1-202ENST00000361901 PLCD1P51178 756 aa10.41□□□□□ -0.74
CALD1-202ENST00000361901 BIRC2Q13490 618 aa10.41□□□□□ -0.74
CALD1-202ENST00000361901 ELF2Q15723 593 aa10.41□□□□□ -0.74
CALD1-202ENST00000361901 UBXN4Q92575 508 aa10.41□□□□□ -0.74
CALD1-202ENST00000361901 ST7Q9NRC1 585 aa10.41□□□□□ -0.74
CALD1-202ENST00000361901 SERPINC1P01008 464 aa10.41□□□□□ -0.74
CALD1-202ENST00000361901 LIFRP42702 1097 aa10.41□□□□□ -0.74
CALD1-202ENST00000361901 USP17L2Q6R6M4 530 aa10.41□□□□□ -0.74
CALD1-202ENST00000361901 RBM28Q9NW13 759 aaKnown RBP10.41□□□□□ -0.74
CALD1-202ENST00000361901 ALX1Q15699 326 aa10.41□□□□□ -0.74
CALD1-202ENST00000361901 ZHX3Q9H4I2 956 aa10.41□□□□□ -0.74
CALD1-202ENST00000361901 ANO10Q9NW15 660 aa10.41□□□□□ -0.74
CALD1-202ENST00000361901 TRMT1Q9NXH9 659 aaKnown RBP10.41□□□□□ -0.74
CALD1-202ENST00000361901 KIF23Q02241 960 aaPredicted RBP10.4□□□□□ -0.74
CALD1-202ENST00000361901 UVSSAQ2YD98 709 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 JAKMIP3Q5VZ66 844 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 PNPLA7Q6ZV29 1317 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 PROM2Q8N271 834 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 CDK5RAP3Q96JB5 506 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 PGBD1Q96JS3 809 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 RIOK1Q9BRS2 568 aaKnown RBP10.4□□□□□ -0.74
CALD1-202ENST00000361901 HPS5Q9UPZ3 1129 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 ARFGEF2Q9Y6D5 1785 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 AHDC1Q5TGY3 1603 aaPredicted RBP10.4□□□□□ -0.74
CALD1-202ENST00000361901 MICALL1Q8N3F8 863 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 SMARCC2Q8TAQ2 1214 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 KCNQ5Q9NR82 932 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 ZNF277Q9NRM2 450 aaPredicted RBP10.4□□□□□ -0.74
CALD1-202ENST00000361901 NHSL1Q5SYE7 1610 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 LTBP4Q8N2S1 1624 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 PSDA5PKW4 1024 aaPredicted RBP10.4□□□□□ -0.74
CALD1-202ENST00000361901 KIF28PB7ZC32 967 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 KLRF2D3W0D1 207 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 CDK8P49336 464 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 FAM160A1Q05DH4 1040 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 NOSTRINQ8IVI9 506 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 SP8Q8IXZ3 490 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 TDRD7Q8NHU6 1098 aaKnown RBP10.4□□□□□ -0.74
CALD1-202ENST00000361901 COA1Q9GZY4 146 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 ATP6V0A2Q9Y487 856 aa10.4□□□□□ -0.74
CALD1-202ENST00000361901 FOXP2O15409 715 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 GDF11O95390 407 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 TNNI2P48788 182 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 NDUFA8P51970 172 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 SLC15A2Q16348 729 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 LETM2Q2VYF4 491 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 HSP90B2PQ58FF3 399 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 AOPEPQ8N6M6 819 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 NKX2-3Q8TAU0 364 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 TDRD3Q9H7E2 651 aaKnown RBP10.39□□□□□ -0.75
CALD1-202ENST00000361901 HDAC9Q9UKV0 1011 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 SUFUQ9UMX1 484 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 MORC2Q9Y6X9 1032 aaPredicted RBP10.39□□□□□ -0.75
CALD1-202ENST00000361901 PKD1L3Q7Z443 1732 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 LRP6O75581 1613 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 ZNF202O95125 648 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 IFNAR1P17181 557 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 GUCY2CP25092 1073 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 GNAQP50148 359 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 PRKG1Q13976 671 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 OXER1Q8TDS5 423 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 RRP36Q96EU6 259 aaKnown RBP10.39□□□□□ -0.75
CALD1-202ENST00000361901 CXorf56Q9H5V9 222 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 RRP15Q9Y3B9 282 aaKnown RBP10.39□□□□□ -0.75
CALD1-202ENST00000361901 VIRMAQ69YN4 1812 aaKnown RBP10.39□□□□□ -0.75
CALD1-202ENST00000361901 POLR2DO15514 142 aaKnown RBP10.39□□□□□ -0.75
CALD1-202ENST00000361901 PTGS1P23219 599 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 TM4SF1P30408 202 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 PSEN1P49768 467 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 CCDC186Q7Z3E2 898 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 KRI1Q8N9T8 703 aaKnown RBP10.39□□□□□ -0.75
CALD1-202ENST00000361901 FAM200AQ8TCP9 573 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 ANKRD7Q92527 254 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 CRAMP1Q96RY5 1269 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 NBPF3Q9H094 633 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 MROH7-TTC4A0A0A0MT08 1334 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 SLURP2P0DP57 97 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 SRGNP10124 158 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 SLC16A2P36021 539 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 STX1AQ16623 288 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 POTEAQ6S8J7 498 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 FAM43BQ6ZT52 329 aaPredicted RBP10.39□□□□□ -0.75
CALD1-202ENST00000361901 SPICE1Q8N0Z3 855 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 PYCARDQ9ULZ3 195 aa10.39□□□□□ -0.75
CALD1-202ENST00000361901 MYO1BO43795 1136 aa10.38□□□□□ -0.75
CALD1-202ENST00000361901 ECE2O60344 883 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms