RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 FANCCQ00597 558 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 PABPC4Q13310 644 aaKnown RBP eCLIP20.69■□□□□ 0.9
CLIP2-202ENST00000361545 VWA3BQ502W6 1294 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 OTUD6AQ7L8S5 288 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 TRMT44Q8IYL2 757 aaKnown RBP20.69■□□□□ 0.9
CLIP2-202ENST00000361545 THRAP3Q9Y2W1 955 aaKnown RBP20.69■□□□□ 0.9
CLIP2-202ENST00000361545 SMIM23A6NLE4 172 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 CD19P15391 556 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 ASIC2Q16515 512 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 FAM102BQ5T8I3 360 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 NT5C3AQ9H0P0 336 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 CCPG1Q9ULG6 757 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 AGTPBP1Q9UPW5 1226 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 NELFBQ8WX92 580 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 WDR70Q9NW82 654 aa20.69■□□□□ 0.9
CLIP2-202ENST00000361545 RNF169Q8NCN4 708 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 PCDHA12Q9UN75 941 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 ZMYM6O95789 1325 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 SEL1L2Q5TEA6 688 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 SUSD4Q5VX71 490 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 CCDC63Q8NA47 563 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 DEPTORQ8TB45 409 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 FAM170AA1A519 330 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 ERVV-1B6SEH8 477 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 GDF11O95390 407 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 GPR101Q96P66 508 aaPredicted RBP20.68■□□□□ 0.9
CLIP2-202ENST00000361545 MTUS1Q9ULD2 1270 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 PCDHA1Q9Y5I3 950 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 RHOXF2BP0C7M4 288 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 PNOCQ13519 176 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 RHOXF2Q9BQY4 288 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 MED23Q9ULK4 1368 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 POLA2Q14181 598 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 KIF22Q14807 665 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 TMC4Q7Z404 712 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 GPBP1Q86WP2 473 aa20.68■□□□□ 0.9
CLIP2-202ENST00000361545 CYP27B1O15528 508 aa20.67■□□□□ 0.9
CLIP2-202ENST00000361545 TNNI1P19237 187 aa20.67■□□□□ 0.9
CLIP2-202ENST00000361545 NLRP12P59046 1061 aa20.67■□□□□ 0.9
CLIP2-202ENST00000361545 SPOUT1Q5T280 376 aaKnown RBP20.67■□□□□ 0.9
CLIP2-202ENST00000361545 GOLGA1Q92805 767 aa20.67■□□□□ 0.9
CLIP2-202ENST00000361545 GPR108Q9NPR9 543 aa20.67■□□□□ 0.9
CLIP2-202ENST00000361545 PREX2Q70Z35 1606 aa20.67■□□□□ 0.9
CLIP2-202ENST00000361545 ADGRL3Q9HAR2 1447 aa20.67■□□□□ 0.9
CLIP2-202ENST00000361545 AFF2P51816 1311 aa20.67■□□□□ 0.9
CLIP2-202ENST00000361545 GTF2F1P35269 517 aaKnown RBP eCLIP20.67■□□□□ 0.9
CLIP2-202ENST00000361545 SREK1Q8WXA9 508 aaKnown RBP20.67■□□□□ 0.9
CLIP2-202ENST00000361545 PCDHB13Q9Y5F0 798 aa20.67■□□□□ 0.9
CLIP2-202ENST00000361545 MAP3K4Q9Y6R4 1608 aa20.67■□□□□ 0.9
CLIP2-202ENST00000361545 ERCC6L2Q5T890 1561 aa20.67■□□□□ 0.9
CLIP2-202ENST00000361545 BTBD18B2RXH4 712 aa20.67■□□□□ 0.9
CLIP2-202ENST00000361545 SLU7O95391 586 aaKnown RBP20.67■□□□□ 0.9
CLIP2-202ENST00000361545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.67■□□□□ 0.9
CLIP2-202ENST00000361545 PFKFB2O60825 505 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 RNASE9P60153 205 aaKnown RBP20.66■□□□□ 0.9
CLIP2-202ENST00000361545 SPECC1LQ69YQ0 1117 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 MICALCLQ6ZW33 695 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 NEK8Q86SG6 692 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 TSGA10Q9BZW7 698 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 ZSWIM6Q9HCJ5 1215 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 NOX5Q96PH1 765 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 SUGCTQ9HAC7 445 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 TXNDC16Q9P2K2 825 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 ADCY9O60503 1353 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 M0R2C6 588 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 CCDC93Q567U6 631 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 XKR9Q5GH70 373 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 RBSNQ9H1K0 784 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 PRKAB2O43741 272 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 ZMYM1Q5SVZ6 1142 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 CC2D2BQ6DHV5 1058 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 MCF2L2Q86YR7 1114 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 CBX8Q9HC52 389 aa20.66■□□□□ 0.9
CLIP2-202ENST00000361545 DDAH1O94760 285 aa20.65■□□□□ 0.9
CLIP2-202ENST00000361545 UTP14CQ5TAP6 766 aaKnown RBP20.65■□□□□ 0.9
CLIP2-202ENST00000361545 LIN9Q5TKA1 542 aa20.65■□□□□ 0.9
CLIP2-202ENST00000361545 ABCC3O15438 1527 aa20.65■□□□□ 0.9
CLIP2-202ENST00000361545 LRMPQ12912 555 aa20.65■□□□□ 0.9
CLIP2-202ENST00000361545 PLA2G4DQ86XP0 818 aa20.65■□□□□ 0.9
CLIP2-202ENST00000361545 AXIN2Q9Y2T1 843 aa20.65■□□□□ 0.9
CLIP2-202ENST00000361545 DIXDC1Q155Q3 683 aa20.65■□□□□ 0.9
CLIP2-202ENST00000361545 DDX25Q9UHL0 483 aaKnown RBP20.65■□□□□ 0.9
CLIP2-202ENST00000361545 KIF1BO60333 1816 aa20.65■□□□□ 0.9
CLIP2-202ENST00000361545 TLDC2A0PJX2 215 aa20.65■□□□□ 0.9
CLIP2-202ENST00000361545 TRIM14Q14142 442 aa20.65■□□□□ 0.9
CLIP2-202ENST00000361545 DALRD3Q5D0E6 543 aaKnown RBP20.65■□□□□ 0.9
CLIP2-202ENST00000361545 SRRTQ9BXP5 876 aaKnown RBP20.65■□□□□ 0.9
CLIP2-202ENST00000361545 ATP2C2O75185 946 aa20.64■□□□□ 0.9
CLIP2-202ENST00000361545 CYP2J2P51589 502 aa20.64■□□□□ 0.9
CLIP2-202ENST00000361545 CALCOCO2Q13137 446 aa20.64■□□□□ 0.9
CLIP2-202ENST00000361545 KCTD1Q719H9 257 aa20.64■□□□□ 0.9
CLIP2-202ENST00000361545 NACA2Q9H009 215 aa20.64■□□□□ 0.9
CLIP2-202ENST00000361545 KDM3AQ9Y4C1 1321 aa20.64■□□□□ 0.9
CLIP2-202ENST00000361545 UBXN2AP68543 259 aa20.64■□□□□ 0.9
CLIP2-202ENST00000361545 USP28Q96RU2 1077 aa20.64■□□□□ 0.9
CLIP2-202ENST00000361545 CLASP1Q7Z460 1538 aa20.64■□□□□ 0.89
CLIP2-202ENST00000361545 PRPF6O94906 941 aaKnown RBP20.64■□□□□ 0.89
CLIP2-202ENST00000361545 HLFQ16534 295 aa20.64■□□□□ 0.89
CLIP2-202ENST00000361545 CCDC17Q96LX7 622 aa20.64■□□□□ 0.89
CLIP2-202ENST00000361545 FAM169AQ9Y6X4 670 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms