RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 UBA7P41226 1012 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 PRAMEF18Q5VWM3 479 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 ARHGAP27Q6ZUM4 889 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 PRMT6Q96LA8 375 aaPredicted RBP13.28□□□□□ -0.28
HPS1-204ENST00000361490 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.28□□□□□ -0.28
HPS1-204ENST00000361490 CBX8Q9HC52 389 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 IL17RBQ9NRM6 502 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 COBLO75128 1261 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 WDHD1O75717 1129 aaPredicted RBP13.28□□□□□ -0.28
HPS1-204ENST00000361490 ECM2O94769 699 aaPredicted RBP13.28□□□□□ -0.28
HPS1-204ENST00000361490 CASP1P29466 404 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 PTGDRQ13258 359 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 SEPT2Q15019 361 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 SEC23AQ15436 765 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 SHROOM1Q2M3G4 852 aaPredicted RBP13.28□□□□□ -0.28
HPS1-204ENST00000361490 FCHSD1Q86WN1 690 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 CDK5RAP3Q96JB5 506 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 CCNT1O60563 726 aaKnown RBP13.28□□□□□ -0.28
HPS1-204ENST00000361490 DDAH1O94760 285 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 GRIN1Q05586 938 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 SLC39A14Q15043 492 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 DALRD3Q5D0E6 543 aaKnown RBP13.28□□□□□ -0.28
HPS1-204ENST00000361490 TTBK2Q6IQ55 1244 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
HPS1-204ENST00000361490 SUPT20HQ8NEM7 779 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 ARID3AQ99856 593 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 YEATS4O95619 227 aa13.27□□□□□ -0.28
HPS1-204ENST00000361490 STX1AQ16623 288 aa13.27□□□□□ -0.28
HPS1-204ENST00000361490 ZFP91Q96JP5 570 aaPredicted RBP13.27□□□□□ -0.28
HPS1-204ENST00000361490 GH2P01242 217 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 TOP1P11387 765 aaKnown RBP13.27□□□□□ -0.29
HPS1-204ENST00000361490 ZNF76P36508 570 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 ICA1Q05084 483 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 TBC1D10BQ4KMP7 808 aaPredicted RBP13.27□□□□□ -0.29
HPS1-204ENST00000361490 ZNF592Q92610 1267 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 EPSTI1Q96J88 318 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 PSMD14O00487 310 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 ORC4O43929 436 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 USP49Q70CQ1 688 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 DGKHQ86XP1 1220 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 BLIDQ8IZY5 108 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 CAMKK2Q96RR4 588 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 C6orf50Q9HD87 102 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 SERTAD1Q9UHV2 236 aa13.27□□□□□ -0.29
HPS1-204ENST00000361490 CALML3P27482 149 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 TXKP42681 527 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 CCDC178Q5BJE1 867 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 C17orf53Q8N3J3 647 aaPredicted RBP13.26□□□□□ -0.29
HPS1-204ENST00000361490 TMEM87AQ8NBN3 555 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 EEF2KMTQ96G04 330 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 CSRNP2Q9H175 543 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 BLZF1Q9H2G9 400 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 PODXL2Q9NZ53 605 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 BTAF1O14981 1849 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 ELP1O95163 1332 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 WDR19Q8NEZ3 1342 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 TJP1Q07157 1748 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 DDTLA6NHG4 134 aaPredicted RBP13.26□□□□□ -0.29
HPS1-204ENST00000361490 CTAGE5O15320 804 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 CPXCR1Q8N123 301 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 FAM43AQ8N2R8 423 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 CCDC148Q8NFR7 591 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 POLR3EQ9NVU0 708 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 CCDC39Q9UFE4 941 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 TCHHQ07283 1943 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 PRPF3O43395 683 aaKnown RBP13.26□□□□□ -0.29
HPS1-204ENST00000361490 PCP11498 1178 aaKnown RBP13.26□□□□□ -0.29
HPS1-204ENST00000361490 ABCB5Q2M3G0 1257 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 OSBPL5Q9H0X9 879 aaPredicted RBP13.26□□□□□ -0.29
HPS1-204ENST00000361490 ANAPC4Q9UJX5 808 aa13.26□□□□□ -0.29
HPS1-204ENST00000361490 FOXN1O15353 648 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 RHBDL3P58872 404 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 PPP4CP60510 307 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 SBK1Q52WX2 424 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 CC2D2BQ6DHV5 1058 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 CCDC174Q6PII3 467 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 C11orf57Q6ZUT1 292 aaPredicted RBP13.25□□□□□ -0.29
HPS1-204ENST00000361490 EARS2Q5JPH6 523 aaKnown RBP13.25□□□□□ -0.29
HPS1-204ENST00000361490 STRIP1Q5VSL9 837 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 SMARCE1Q969G3 411 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 TAOK3Q9H2K8 898 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 RRAGDQ9NQL2 400 aaPredicted RBP13.25□□□□□ -0.29
HPS1-204ENST00000361490 HOMER2Q9NSB8 354 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.25□□□□□ -0.29
HPS1-204ENST00000361490 PI4KBQ9UBF8 816 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 NUP188Q5SRE5 1749 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 TMEM232C9JQI7 657 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 TTLL1O95922 423 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 IDEP14735 1019 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 EVCP57679 992 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 PPP2R5BQ15173 497 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 UBE2SQ16763 222 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 LONRF3Q496Y0 759 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 SLFN13Q68D06 897 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 TRMT44Q8IYL2 757 aaKnown RBP13.25□□□□□ -0.29
HPS1-204ENST00000361490 CCDC12Q8WUD4 166 aaPredicted RBP13.25□□□□□ -0.29
HPS1-204ENST00000361490 KIFC2Q96AC6 838 aa13.25□□□□□ -0.29
HPS1-204ENST00000361490 RGL2O15211 777 aa13.24□□□□□ -0.29
HPS1-204ENST00000361490 ATL3Q6DD88 541 aa13.24□□□□□ -0.29
HPS1-204ENST00000361490 EEF2P13639 858 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms