RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TROVE2P10155 538 aaKnown RBP eCLIP10.66□□□□□ -0.73e-6■■□□□ 11.8
CUX1-203ENST00000360264 B4E1Z4 1266 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 BUB1BO60566 1050 aaPredicted RBP10.66□□□□□ -0.7
CUX1-203ENST00000360264 STAT1P42224 750 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 CCHCR1Q8TD31 782 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 APPBP2Q92624 585 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 IFT122Q9HBG6 1241 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 EPS15L1Q9UBC2 864 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 KAT6AQ92794 2004 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 SPDYE16A6NNV3 312 aaPredicted RBP10.66□□□□□ -0.7
CUX1-203ENST00000360264 HOXC9P31274 260 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 KARSQ15046 597 aaKnown RBP10.66□□□□□ -0.7
CUX1-203ENST00000360264 SPDYE2Q495Y8 402 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 CCPG1Q9ULG6 757 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 A0A1B0GUL7 405 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 TNNI3KQ59H18 835 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 MLXIPQ9HAP2 919 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 FPGT-TNNI3KV9GXZ4 949 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 GPAA1O43292 621 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 ELMSAN1Q6PJG2 1045 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 PALM2Q8IXS6 379 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 BBS5Q8N3I7 341 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 TRIM58Q8NG06 486 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 MEIS3Q99687 375 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 CSADQ9Y600 493 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 SDCCAG3Q96C92 435 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 JPH2Q9BR39 696 aaPredicted RBP10.66□□□□□ -0.7
CUX1-203ENST00000360264 RNMTO43148 476 aaKnown RBP10.66□□□□□ -0.7
CUX1-203ENST00000360264 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 PRR16Q569H4 304 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.66□□□□□ -0.76e-7■■■■■ 53.4
CUX1-203ENST00000360264 KDM5AP29375 1690 aaKnown RBP10.66□□□□□ -0.7
CUX1-203ENST00000360264 TRIM56Q9BRZ2 755 aaKnown RBP10.66□□□□□ -0.7
CUX1-203ENST00000360264 IFIH1Q9BYX4 1025 aaKnown RBP10.66□□□□□ -0.7
CUX1-203ENST00000360264 ANKFY1Q9P2R3 1169 aa10.66□□□□□ -0.7
CUX1-203ENST00000360264 KLHL30Q0D2K2 578 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 SPATA5Q8NB90 893 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 ANAPC5Q9UJX4 755 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 LMTK3Q96Q04 1460 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 MED10Q9BTT4 135 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 SAP30BPQ9UHR5 308 aaKnown RBP10.65□□□□□ -0.7
CUX1-203ENST00000360264 WWC3Q9ULE0 1092 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 GARSP41250 739 aaKnown RBP10.65□□□□□ -0.7
CUX1-203ENST00000360264 SNX29Q8TEQ0 813 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 ARHGAP6O43182 974 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 HADHQ16836 314 aaKnown RBP10.65□□□□□ -0.7
CUX1-203ENST00000360264 ZC3H15Q8WU90 426 aaKnown RBP10.65□□□□□ -0.7
CUX1-203ENST00000360264 TYW1Q9NV66 732 aaKnown RBP10.65□□□□□ -0.7
CUX1-203ENST00000360264 DISP3Q9P2K9 1392 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 MAP7D3Q8IWC1 876 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 MRPL11Q9Y3B7 192 aaKnown RBP10.65□□□□□ -0.7
CUX1-203ENST00000360264 TNNI1P19237 187 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 ATP6V1E1P36543 226 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 EVCP57679 992 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 NELFBQ8WX92 580 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 FAM81BQ96LP2 452 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 NFKBIAP25963 317 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 LMNB2Q03252 620 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 JARID2Q92833 1246 aaPredicted RBP10.65□□□□□ -0.7
CUX1-203ENST00000360264 PLIN2Q99541 437 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 ATP8A2Q9NTI2 1148 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 TTLL3Q9Y4R7 772 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 CHMLP26374 656 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 BPIFB4P59827 614 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 DBN1Q16643 649 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 VSIG1Q86XK7 387 aa10.65□□□□□ -0.7
CUX1-203ENST00000360264 AATFQ9NY61 560 aaKnown RBP eCLIP10.65□□□□□ -0.71e-6■■■■■ 27.8
CUX1-203ENST00000360264 MYCLP12524 364 aaPredicted RBP10.65□□□□□ -0.71
CUX1-203ENST00000360264 THAP12O43422 761 aa10.65□□□□□ -0.71
CUX1-203ENST00000360264 INPP5BP32019 993 aa10.65□□□□□ -0.71
CUX1-203ENST00000360264 IRX5P78411 483 aaPredicted RBP10.65□□□□□ -0.71
CUX1-203ENST00000360264 TFDP1Q14186 410 aa10.65□□□□□ -0.71
CUX1-203ENST00000360264 RNF10Q8N5U6 811 aaKnown RBP10.65□□□□□ -0.71
CUX1-203ENST00000360264 DSCC1Q9BVC3 393 aa10.65□□□□□ -0.71
CUX1-203ENST00000360264 ZNF202O95125 648 aa10.65□□□□□ -0.71
CUX1-203ENST00000360264 RXRAP19793 462 aa10.65□□□□□ -0.71
CUX1-203ENST00000360264 NAA25Q14CX7 972 aa10.65□□□□□ -0.71
CUX1-203ENST00000360264 NSMFQ6X4W1 530 aa10.65□□□□□ -0.71
CUX1-203ENST00000360264 KLHL14Q9P2G3 628 aa10.65□□□□□ -0.71
CUX1-203ENST00000360264 A2MP01023 1474 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 KRT19P08727 400 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 CD19P15391 556 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 KPNA2P52292 529 aaKnown RBP10.64□□□□□ -0.71
CUX1-203ENST00000360264 DCPSQ96C86 337 aaKnown RBP10.64□□□□□ -0.71
CUX1-203ENST00000360264 SCYL1Q96KG9 808 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 PCDHB13Q9Y5F0 798 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 DNAJC8O75937 253 aaPredicted RBP10.64□□□□□ -0.71
CUX1-203ENST00000360264 HPDP32754 393 aaPredicted RBP10.64□□□□□ -0.71
CUX1-203ENST00000360264 USH1GQ495M9 461 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 EVI5O60447 810 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 COG7P83436 770 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 USP26Q9BXU7 913 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 HMGB3O15347 200 aaKnown RBP10.64□□□□□ -0.71
CUX1-203ENST00000360264 TBC1D8O95759 1140 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 DLGAP5Q15398 846 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 CHST3Q7LGC8 479 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 METTL14Q9HCE5 456 aaKnown RBP10.64□□□□□ -0.71
CUX1-203ENST00000360264 PA2G4Q9UQ80 394 aaKnown RBP10.64□□□□□ -0.71
CUX1-203ENST00000360264 NFE2L3Q9Y4A8 694 aa10.64□□□□□ -0.71
CUX1-203ENST00000360264 RAB44Q7Z6P3 723 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms