RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 DDX11Q96FC9 970 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 ABHD8Q96I13 439 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 TMEM39BQ9GZU3 492 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 DHX36Q9H2U1 1008 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 TCP11L1Q9NUJ3 509 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 TMOD2Q9NZR1 351 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 BRPF3Q9ULD4 1205 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 DAGLAQ9Y4D2 1042 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 CA12O43570 354 aa12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 IFNAR1P17181 557 aa12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 UBE2HP62256 183 aa12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 ST3GAL1Q11201 340 aa12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 SPRYD7Q5W111 196 aa12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 ARMC9Q7Z3E5 817 aa12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 ZNF654Q8IZM8 581 aa12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 FANCBQ8NB91 859 aa12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 ZDHHC15Q96MV8 337 aa12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 TRIM34Q9BYJ4 488 aa12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 KAT14Q9H8E8 782 aa12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 LMBRD1Q9NUN5 540 aa12.47□□□□□ -0.41
TRAPPC4-201ENST00000359005 ELP1O95163 1332 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 FLT1P17948 1338 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 MYO1BO43795 1136 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 JAK2O60674 1132 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 DEXIO95424 95 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 TBC1D8O95759 1140 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 NF2P35240 595 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 TM4SF4P48230 202 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 MAPKAPK5Q8IW41 473 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 CNKSR2Q8WXI2 1034 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 LZTS2Q9BRK4 669 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 MCOLN1Q9GZU1 580 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 NCOA5Q9HCD5 579 aaKnown RBP12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 USP40Q9NVE5 1235 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 HPS5Q9UPZ3 1129 aa12.46□□□□□ -0.41
TRAPPC4-201ENST00000359005 BAZ2AQ9UIF9 1905 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 FMNL1O95466 1100 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 TFAP4Q01664 338 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 NFIAQ12857 509 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 SEC23AQ15436 765 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 SUPT20HL1Q3ZLR7 823 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 C16orf86Q6ZW13 317 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 ZFPM1Q8IX07 1006 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 FAM177A1Q8N128 213 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 FBXO18Q8NFZ0 1043 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 NUP133Q8WUM0 1156 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 ANKS1AQ92625 1134 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 SLC10A4Q96EP9 437 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 RNF26Q9BY78 433 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 BRMS1Q9HCU9 246 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 SAGE1Q9NXZ1 904 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 PPP2R3BQ9Y5P8 575 aa12.45□□□□□ -0.42
TRAPPC4-201ENST00000359005 CTDNEP1O95476 244 aa12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 SLURP2P0DP57 97 aa12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 RHBDL3P58872 404 aa12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 CDC42EP5Q6NZY7 148 aa12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 STK11IPQ8N1F8 1099 aa12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 ENAHQ8N8S7 591 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 WNK4Q96J92 1243 aa12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 SPATA32Q96LK8 384 aa12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 PTPN18Q99952 460 aa12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 ZKSCAN3Q9BRR0 538 aa12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 ALG1Q9BT22 464 aa12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 EHD4Q9H223 541 aa12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 FOCADQ5VW36 1801 aa12.44□□□□□ -0.42
TRAPPC4-201ENST00000359005 PAPPA2Q9BXP8 1791 aa12.43□□□□□ -0.42
TRAPPC4-201ENST00000359005 CYP2D7A0A087X1C5 515 aa12.43□□□□□ -0.42
TRAPPC4-201ENST00000359005 GOLGA6L3A6NEY3 463 aa12.43□□□□□ -0.42
TRAPPC4-201ENST00000359005 IGF2BP3O00425 579 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRAPPC4-201ENST00000359005 PPP1R12BO60237 982 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-201ENST00000359005 PRDM1O75626 825 aa12.43□□□□□ -0.42
TRAPPC4-201ENST00000359005 ADD1P35611 737 aaKnown RBP12.43□□□□□ -0.42
TRAPPC4-201ENST00000359005 COL9A3Q14050 684 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC4-201ENST00000359005 CCDC17Q96LX7 622 aa12.43□□□□□ -0.42
TRAPPC4-201ENST00000359005 SERPINB13Q9UIV8 391 aa12.43□□□□□ -0.42
TRAPPC4-201ENST00000359005 FIBPO43427 364 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 ENTPD3O75355 529 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 CDK8P49336 464 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 CAP1Q01518 475 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 DNM1Q05193 864 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 RESTQ13127 1097 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 PICALMQ13492 652 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 DGKZQ13574 1117 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 MIGA2Q7L4E1 593 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 FERMT3Q86UX7 667 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 FOXP4Q8IVH2 680 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 CRACR2BQ8N4Y2 399 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 NEDD1Q8NHV4 660 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 IDI2Q9BXS1 227 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 SLC26A6Q9BXS9 759 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 OSBPL5Q9H0X9 879 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 ELP3Q9H9T3 547 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 INCENPQ9NQS7 918 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 GPHNQ9NQX3 736 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 FAM198AQ9UFP1 575 aa12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 SAP30BPQ9UHR5 308 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-201ENST00000359005 MYH1P12882 1939 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms