RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 CAPS2Q9BXY5 557 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 NYXQ9GZU5 481 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 ZBBXA8MT70 800 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 COBLO75128 1261 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 GABPB1Q06547 395 aaPredicted RBP12.33□□□□□ -0.44
COL11A1-202ENST00000358392 KCTD16Q68DU8 428 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 PPP4R4Q6NUP7 873 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 SEPT8Q92599 483 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 BCL2L12Q9HB09 334 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 DNM3Q9UQ16 869 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 FIS1Q9Y3D6 152 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 FLOT1O75955 427 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 SNCBQ16143 134 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 NAA35Q5VZE5 725 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 CDAN1Q8IWY9 1227 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 TMOD4Q9NZQ9 345 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 CEBPAP49715 358 aaPredicted RBP12.33□□□□□ -0.44
COL11A1-202ENST00000358392 TIMM10P62072 90 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 CDR2Q01850 454 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 CABP7Q86V35 215 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 TPH2Q8IWU9 490 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 TSPYL6Q8N831 410 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 TCP10Q12799 353 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 CMTR1Q8N1G2 835 aaKnown RBP12.32□□□□□ -0.44
COL11A1-202ENST00000358392 PSPC1Q8WXF1 523 aaKnown RBP12.32□□□□□ -0.44
COL11A1-202ENST00000358392 BCAP29Q9UHQ4 241 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 SAR1BQ9Y6B6 198 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 E2F5Q15329 346 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 TRPA1O75762 1119 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 EP400NLQ6ZTU2 488 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 SDCCAG3Q96C92 435 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 FAM227BQ96M60 508 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 IMPACTQ9P2X3 320 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 PHBP35232 272 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 IRX4P78413 519 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 RAB20Q9NX57 234 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 PARP2Q9UGN5 583 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 BAG5Q9UL15 447 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 PARP3Q9Y6F1 533 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 OATP04181 439 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 RLBP1P12271 317 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 TTBK2Q6IQ55 1244 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 RASEFQ8IZ41 740 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 METTL13Q8N6R0 699 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 P3H4Q92791 437 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 Q9H521 79 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 TIAM1Q13009 1591 aa12.32□□□□□ -0.44
COL11A1-202ENST00000358392 CUTAO60888 179 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 ECE1P42892 770 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 AP1ARQ63HQ0 302 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 FAM102BQ5T8I3 360 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 MAP3K21Q5TCX8 1036 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 TRIM50Q86XT4 487 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 KLHDC4Q8TBB5 520 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 INTS4Q96HW7 963 aaKnown RBP12.31□□□□□ -0.44
COL11A1-202ENST00000358392 ZNF594Q96JF6 807 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-202ENST00000358392 XPO4Q9C0E2 1151 aaKnown RBP12.31□□□□□ -0.44
COL11A1-202ENST00000358392 POC1B-GALNT4F8VUJ3 575 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 STAM2O75886 525 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 PPP1R2P41236 205 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 MCUQ8NE86 351 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 A6NNZ2 444 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 TUBB8Q3ZCM7 444 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 LRWD1Q9UFC0 647 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 INTUQ9ULD6 942 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 RAD50Q92878 1312 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 GOLGA8KD6RF30 607 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 YARSP54577 528 aaKnown RBP12.31□□□□□ -0.44
COL11A1-202ENST00000358392 RAPH1Q70E73 1250 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 RNF169Q8NCN4 708 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 OTUD7AQ8TE49 926 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-202ENST00000358392 IFT122Q9HBG6 1241 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 SNX14Q9Y5W7 946 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 MAD1L1Q9Y6D9 718 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 IL16Q14005 1332 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 POGZQ7Z3K3 1410 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 CCT5P48643 541 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 DIS3L2Q8IYB7 885 aaKnown RBP12.31□□□□□ -0.44
COL11A1-202ENST00000358392 BCAS4Q8TDM0 211 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 JDP2Q8WYK2 163 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 DDX17Q92841 729 aaKnown RBP12.31□□□□□ -0.44
COL11A1-202ENST00000358392 NOS1P29475 1434 aa12.31□□□□□ -0.44
COL11A1-202ENST00000358392 JAK2O60674 1132 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 IFNAR2P48551 515 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 HAUS8Q9BT25 410 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 TFCP2L1Q9NZI6 479 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 VPS54Q9P1Q0 977 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 ARHGEF11O15085 1522 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 PPFIA4O75335 1185 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 CFBP00751 764 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 BRD3Q15059 726 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 NME8Q8N427 588 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 SPATA17Q96L03 361 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 ARHGEF10LQ9HCE6 1279 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 ABCF3Q9NUQ8 709 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 ARHGAP6O43182 974 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 ALDH1L1O75891 902 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 CSPG5O95196 566 aa12.3□□□□□ -0.44
COL11A1-202ENST00000358392 SLC4A1P02730 911 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms