RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 BICD2Q8TD16 824 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 LMBR1Q8WVP7 490 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 TBC1D5Q92609 795 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 CRAMP1Q96RY5 1269 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 RTFDC1Q9BY42 306 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 PUS3Q9BZE2 481 aaKnown RBP10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 CWC25Q9NXE8 425 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 SAMM50Q9Y512 469 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 SNAP23O00161 211 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 ALDH1L1O75891 902 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 LARGE1O95461 756 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 CHRNA5P30532 468 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 IRAK1P51617 712 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 G3BP1Q13283 466 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 NCAPG2Q86XI2 1143 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 DHX58Q96C10 678 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 NEUROD6Q96NK8 337 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 ESYT1Q9BSJ8 1104 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 DDX19AQ9NUU7 478 aaKnown RBP10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 TMC6Q7Z403 805 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 CNBD1Q8NA66 436 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 PPP1R12BO60237 982 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 RASSF9O75901 435 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 SASH1O94885 1247 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 RPSAP08865 295 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 SFPQP23246 707 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 MAGEA8P43361 318 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 LRRC24Q50LG9 513 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 RTKN2Q8IZC4 609 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 IGSF22Q8N9C0 903 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 RIN2Q8WYP3 895 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 SAAL1Q96ER3 474 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 IL17RAQ96F46 866 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 SETDB2Q96T68 719 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 CRACR2AQ9BSW2 395 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 BOLA2Q9H3K6 86 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 CHCHD3Q9NX63 227 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 RNF181Q9P0P0 153 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 IMPACTQ9P2X3 320 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 BLOC1S6Q9UL45 172 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 GJB2P29033 226 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 PRPHP41219 470 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 TIMM10P62072 90 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 PARP10Q53GL7 1025 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 CEP85LQ5SZL2 805 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 HHATQ5VTY9 493 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 RUFY3Q7L099 469 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 TMC4Q7Z404 712 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 FERMT3Q86UX7 667 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 OR8K1Q8NGG5 319 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 KIFC2Q96AC6 838 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 EAF2Q96CJ1 260 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 UTP14AQ9BVJ6 771 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 MAF1Q9H063 256 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 IL25Q9H293 177 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 TRMT112Q9UI30 125 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 ANAPC4Q9UJX5 808 aa10.53□□□□□ -0.72
SMARCAL1-202ENST00000358207 VPS37CA5D8V6 355 aaPredicted RBP10.52□□□□□ -0.72
SMARCAL1-202ENST00000358207 FZD9O00144 591 aa10.52□□□□□ -0.72
SMARCAL1-202ENST00000358207 VEGFAP15692 232 aaPredicted RBP10.52□□□□□ -0.72
SMARCAL1-202ENST00000358207 VSNL1P62760 191 aa10.52□□□□□ -0.72
SMARCAL1-202ENST00000358207 TFCP2Q12800 502 aa10.52□□□□□ -0.72
SMARCAL1-202ENST00000358207 MAB21L3Q8N8X9 362 aa10.52□□□□□ -0.72
SMARCAL1-202ENST00000358207 CCDC150Q8NCX0 1101 aa10.52□□□□□ -0.72
SMARCAL1-202ENST00000358207 HELBQ8NG08 1087 aaPredicted RBP10.52□□□□□ -0.72
SMARCAL1-202ENST00000358207 BCAS4Q8TDM0 211 aa10.52□□□□□ -0.72
SMARCAL1-202ENST00000358207 PGBD1Q96JS3 809 aa10.52□□□□□ -0.72
SMARCAL1-202ENST00000358207 MPHOSPH8Q99549 860 aa10.52□□□□□ -0.72
SMARCAL1-202ENST00000358207 ANO2Q9NQ90 1003 aa10.52□□□□□ -0.72
SMARCAL1-202ENST00000358207 HMGB1P09429 215 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 MSANTD4Q8NCY6 345 aa10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 XPO4Q9C0E2 1151 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 SUDS3Q9H7L9 328 aaPredicted RBP10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 TFIP11Q9UBB9 837 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 ABCC12Q96J65 1359 aa10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 BECN2A8MW95 431 aa10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 ZEB2O60315 1214 aa10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 RTN3O95197 1032 aaPredicted RBP10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 POLA2Q14181 598 aa10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 E2F5Q15329 346 aa10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 CLASRPQ8N2M8 674 aaKnown RBP10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 CEP112Q8N8E3 955 aa10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 EZH1Q92800 747 aaPredicted RBP10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 SLX1AQ9BQ83 275 aa10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 CENPHQ9H3R5 247 aa10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 NMRK2Q9NPI5 230 aa10.52□□□□□ -0.73
SMARCAL1-202ENST00000358207 GRIN2DO15399 1336 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 ZNF202O95125 648 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 CAVIN2O95810 425 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 ALDH1B1P30837 517 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 AK2P54819 239 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 GNG11P61952 73 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 PDIA5Q14554 519 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 RCSD1Q6JBY9 416 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 TTC14Q96N46 770 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 SMTNP53814 917 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 SLC8A3P57103 927 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 KRT85P78386 507 aa10.51□□□□□ -0.73
SMARCAL1-202ENST00000358207 TCIRG1Q13488 830 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms