RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 GOPCQ9HD26 462 aa20.47■□□□□ 0.87
NCL-202ENST00000356936 MGAMO43451 1857 aa20.47■□□□□ 0.87
NCL-202ENST00000356936 MYH8P13535 1937 aa20.47■□□□□ 0.87
NCL-202ENST00000356936 POTEFA5A3E0 1075 aa20.46■□□□□ 0.87
NCL-202ENST00000356936 EEF2P13639 858 aaKnown RBP20.46■□□□□ 0.87
NCL-202ENST00000356936 ATP2B2Q01814 1243 aa20.46■□□□□ 0.87
NCL-202ENST00000356936 PPARAQ07869 468 aa20.45■□□□□ 0.86
NCL-202ENST00000356936 CCDC129Q6ZRS4 1044 aa20.45■□□□□ 0.86
NCL-202ENST00000356936 CLEC10AQ8IUN9 316 aa20.45■□□□□ 0.86
NCL-202ENST00000356936 STK11IPQ8N1F8 1099 aa20.45■□□□□ 0.86
NCL-202ENST00000356936 SOCS4Q8WXH5 440 aa20.45■□□□□ 0.86
NCL-202ENST00000356936 SPDYE16A6NNV3 312 aaPredicted RBP20.44■□□□□ 0.86
NCL-202ENST00000356936 WDR46O15213 610 aaKnown RBP20.44■□□□□ 0.86
NCL-202ENST00000356936 MYCP01106 439 aaPredicted RBP20.44■□□□□ 0.86
NCL-202ENST00000356936 MFAP1P55081 439 aaKnown RBP20.44■□□□□ 0.86
NCL-202ENST00000356936 FAM227BQ96M60 508 aa20.44■□□□□ 0.86
NCL-202ENST00000356936 NUDT12Q9BQG2 462 aa20.44■□□□□ 0.86
NCL-202ENST00000356936 CWC22Q9HCG8 908 aaKnown RBP20.44■□□□□ 0.86
NCL-202ENST00000356936 NYAP2Q9P242 653 aa20.44■□□□□ 0.86
NCL-202ENST00000356936 HIP1O00291 1037 aa20.43■□□□□ 0.86
NCL-202ENST00000356936 Q3C1V9 767 aa20.43■□□□□ 0.86
NCL-202ENST00000356936 SPICE1Q8N0Z3 855 aa20.43■□□□□ 0.86
NCL-202ENST00000356936 MB21D1Q8N884 522 aa20.43■□□□□ 0.86
NCL-202ENST00000356936 NKX2-3Q8TAU0 364 aa20.43■□□□□ 0.86
NCL-202ENST00000356936 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.43■□□□□ 0.86
NCL-202ENST00000356936 GJD2Q9UKL4 321 aa20.43■□□□□ 0.86
NCL-202ENST00000356936 RBBP6Q7Z6E9 1792 aaKnown RBP20.43■□□□□ 0.86
NCL-202ENST00000356936 A0A0D9SFI3 127 aa20.42■□□□□ 0.86
NCL-202ENST00000356936 PRDM1O75626 825 aa20.42■□□□□ 0.86
NCL-202ENST00000356936 FLOT1O75955 427 aa20.42■□□□□ 0.86
NCL-202ENST00000356936 TSPY3P0CV98 308 aa20.42■□□□□ 0.86
NCL-202ENST00000356936 TSPY8P0CW00 308 aa20.42■□□□□ 0.86
NCL-202ENST00000356936 SDSP20132 328 aa20.42■□□□□ 0.86
NCL-202ENST00000356936 NMIQ13287 307 aaPredicted RBP20.42■□□□□ 0.86
NCL-202ENST00000356936 ALX1Q15699 326 aa20.42■□□□□ 0.86
NCL-202ENST00000356936 PPP4R3BQ5MIZ7 849 aa20.42■□□□□ 0.86
NCL-202ENST00000356936 POTEEQ6S8J3 1075 aa20.42■□□□□ 0.86
NCL-202ENST00000356936 GPR142Q7Z601 462 aa20.42■□□□□ 0.86
NCL-202ENST00000356936 PLEKHH3Q7Z736 793 aa20.42■□□□□ 0.86
NCL-202ENST00000356936 SYNPO2Q9UMS6 1093 aa20.42■□□□□ 0.86
NCL-202ENST00000356936 FOXP2O15409 715 aa20.41■□□□□ 0.86
NCL-202ENST00000356936 RAD21O60216 631 aa20.41■□□□□ 0.86
NCL-202ENST00000356936 PEX10O60683 326 aa20.41■□□□□ 0.86
NCL-202ENST00000356936 CNMDO75829 334 aa20.41■□□□□ 0.86
NCL-202ENST00000356936 XRCC5P13010 732 aaKnown RBP20.41■□□□□ 0.86
NCL-202ENST00000356936 CCL5P13501 91 aa20.41■□□□□ 0.86
NCL-202ENST00000356936 ELNP15502 786 aa20.41■□□□□ 0.86
NCL-202ENST00000356936 EN2P19622 333 aaPredicted RBP20.41■□□□□ 0.86
NCL-202ENST00000356936 KIAA1755Q5JYT7 1200 aa20.41■□□□□ 0.86
NCL-202ENST00000356936 TRMT44Q8IYL2 757 aaKnown RBP20.41■□□□□ 0.86
NCL-202ENST00000356936 RNF208Q9H0X6 261 aa20.41■□□□□ 0.86
NCL-202ENST00000356936 PORCNQ9H237 461 aa20.41■□□□□ 0.86
NCL-202ENST00000356936 ANAPC4Q9UJX5 808 aa20.41■□□□□ 0.86
NCL-202ENST00000356936 TTLL1O95922 423 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 HMGCRP04035 888 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 INHAP05111 366 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 DSG3P32926 999 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 MTFR1Q15390 333 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 VPS53Q5VIR6 699 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 CCDC171Q6TFL3 1326 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 NEDD1Q8NHV4 660 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 PLIN4Q96Q06 1357 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 DIAPH3Q9NSV4 1193 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 BTBD7Q9P203 1132 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 CLIP2Q9UDT6 1046 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 IVNS1ABPQ9Y6Y0 642 aa20.4■□□□□ 0.86
NCL-202ENST00000356936 ZMYM6O95789 1325 aa20.39■□□□□ 0.85
NCL-202ENST00000356936 IGKV6D-41A0A0C4DH26 115 aa20.39■□□□□ 0.85
NCL-202ENST00000356936 GJB1P08034 283 aa20.39■□□□□ 0.85
NCL-202ENST00000356936 HSPD1P10809 573 aaKnown RBP20.39■□□□□ 0.85
NCL-202ENST00000356936 CAPN2P17655 700 aa20.39■□□□□ 0.85
NCL-202ENST00000356936 RGS2P41220 211 aa20.39■□□□□ 0.85
NCL-202ENST00000356936 TFAP4Q01664 338 aa20.39■□□□□ 0.85
NCL-202ENST00000356936 WDR78Q5VTH9 848 aa20.39■□□□□ 0.85
NCL-202ENST00000356936 CEP95Q96GE4 821 aa20.39■□□□□ 0.85
NCL-202ENST00000356936 MTMR4Q9NYA4 1195 aa20.39■□□□□ 0.85
NCL-202ENST00000356936 CENPFP49454 3210 aa20.38■□□□□ 0.85
NCL-202ENST00000356936 GREB1LQ9C091 1923 aaPredicted RBP20.38■□□□□ 0.85
NCL-202ENST00000356936 MKL1Q969V6 931 aa20.38■□□□□ 0.85
NCL-202ENST00000356936 SLC15A5A6NIM6 579 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 TSPY2A6NKD2 308 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 F5H6K3 240 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 FGAP02671 866 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 CYP2B6P20813 491 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 GJA8P48165 433 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 CTDSPL2Q05D32 466 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 KLRC3Q07444 240 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 MORN1Q5T089 497 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 ZNF589Q86UQ0 364 aaPredicted RBP20.37■□□□□ 0.85
NCL-202ENST00000356936 SHCBP1Q8NEM2 672 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 APBA2Q99767 749 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 SPATC1LQ9H0A9 340 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 UNC93B1Q9H1C4 597 aa20.37■□□□□ 0.85
NCL-202ENST00000356936 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.37■□□□□ 0.85
NCL-202ENST00000356936 STRNO43815 780 aa20.36■□□□□ 0.85
NCL-202ENST00000356936 FAM47AQ5JRC9 791 aa20.36■□□□□ 0.85
NCL-202ENST00000356936 FAM83BQ5T0W9 1011 aa20.36■□□□□ 0.85
NCL-202ENST00000356936 SAMD1Q6SPF0 538 aaPredicted RBP20.36■□□□□ 0.85
NCL-202ENST00000356936 CWC27Q6UX04 472 aaKnown RBP20.36■□□□□ 0.85
NCL-202ENST00000356936 USP6NLQ92738 828 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms