RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SPDL1Q96EA4 605 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 EYA3Q99504 573 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 IRAK4Q9NWZ3 460 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 DDX41Q9UJV9 622 aaKnown RBP12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 RASIP1Q5U651 963 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 BCRP11274 1271 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 CD19P15391 556 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 DNM2P50570 870 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 PALM2Q8IXS6 379 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 HAUS4Q9H6D7 363 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 KCNH3Q9ULD8 1083 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 RGS16O15492 202 aaPredicted RBP12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 BAG2O95816 211 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 SLFNL1Q499Z3 407 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 STK24Q9Y6E0 443 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 FBLN1P23142 703 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 CSGALNACT2Q8N6G5 542 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 RNF169Q8NCN4 708 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 CUL7Q14999 1698 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 CEP104O60308 925 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 ATP6V1E1P36543 226 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 WDR7Q9Y4E6 1490 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 LIG3P49916 1009 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 ANKRD2Q9GZV1 360 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 ST7Q9NRC1 585 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 LRRC8AQ8IWT6 810 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 TM6SF1Q9BZW5 370 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 CSPG5O95196 566 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 TNNI1P19237 187 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 LRMPQ12912 555 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 FAF1Q9UNN5 650 aaPredicted RBP12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 SESN3P58005 492 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 CALCRLQ16602 461 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 ANO1Q5XXA6 986 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 JADE1Q6IE81 842 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 CTAGE3PQ8IX95 158 aa12.65□□□□□ -0.38
SPTBN1-202ENST00000356805 DDB1Q16531 1140 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 CPXCR1Q8N123 301 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 ANKRD42Q8N9B4 389 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 TRIML1Q8N9V2 468 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 MSH6P52701 1360 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 SUN1O94901 812 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 GNL1P36915 607 aaPredicted RBP12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 SCYL2Q6P3W7 929 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 HAUS8Q9BT25 410 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 ABCC5O15440 1437 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 MRPL50Q8N5N7 158 aaKnown RBP12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 TCP10Q12799 353 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 LCA5Q86VQ0 697 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 TRIM50Q86XT4 487 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 RUNDC3BQ96NL0 473 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 BICC1Q9H694 974 aaKnown RBP12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 BAG5Q9UL15 447 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 CAPN9O14815 690 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 MBD4O95243 580 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 P4HA1P13674 534 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 CTNNA1P35221 906 aaKnown RBP12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 ARHGAP44Q17R89 818 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 YARSP54577 528 aaKnown RBP12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 NBPF14Q5TI25 921 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 PPP1R9AQ9ULJ8 1098 aa12.64□□□□□ -0.39
SPTBN1-202ENST00000356805 ARHGEF11O15085 1522 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 B4E1Z4 1266 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 RPS6KA1Q15418 735 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 FAM47CQ5HY64 1035 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 DYMQ7RTS9 669 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 CNOT10Q9H9A5 744 aaKnown RBP12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 PAK1Q13153 545 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 CDK13Q14004 1512 aaKnown RBP12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 ARHGEF12Q9NZN5 1544 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 MMEL1Q495T6 779 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 PEX26Q7Z412 305 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 CCDC13Q8IYE1 715 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 TUBB6Q9BUF5 446 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 OLA1Q9NTK5 396 aaKnown RBP12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 MAPKBP1O60336 1514 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 UFL1O94874 794 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 PARD3BQ8TEW8 1205 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 TMEM63CQ9P1W3 806 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 POLKQ9UBT6 870 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 SCOCQ9UIL1 159 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 ZNF202O95125 648 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 STX2P32856 288 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 PEX19P40855 299 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 PHEXP78562 749 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 RDH13Q8NBN7 331 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 NFATC2IPQ8NCF5 419 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 SEPT8Q92599 483 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 SDCCAG3Q96C92 435 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 SKIP12755 728 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 CEP85Q6P2H3 762 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 HACE1Q8IYU2 909 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 MORC4Q8TE76 937 aa12.63□□□□□ -0.39
SPTBN1-202ENST00000356805 DNM3Q9UQ16 869 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms