RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
FN1-204ENST00000356005 BTDP43251 543 aa12.52□□□□□ -0.4
FN1-204ENST00000356005 SCNN1DP51172 638 aa12.52□□□□□ -0.4
FN1-204ENST00000356005 NUCKS1Q9H1E3 243 aaKnown RBP12.52□□□□□ -0.4
FN1-204ENST00000356005 UQCRHLA0A096LP55 91 aa12.52□□□□□ -0.4
FN1-204ENST00000356005 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.4
FN1-204ENST00000356005 UQCRHP07919 91 aa12.52□□□□□ -0.4
FN1-204ENST00000356005 ERCC5P28715 1186 aaPredicted RBP12.52□□□□□ -0.4
FN1-204ENST00000356005 SMC1BQ8NDV3 1235 aa12.52□□□□□ -0.4
FN1-204ENST00000356005 CCDC26Q8TAB7 109 aa12.52□□□□□ -0.4
FN1-204ENST00000356005 ZNF526Q8TF50 670 aaPredicted RBP12.52□□□□□ -0.4
FN1-204ENST00000356005 NOC4LQ9BVI4 516 aaKnown RBP12.52□□□□□ -0.4
FN1-204ENST00000356005 TEKT3Q9BXF9 490 aa12.52□□□□□ -0.4
FN1-204ENST00000356005 AFF2P51816 1311 aa12.52□□□□□ -0.4
FN1-204ENST00000356005 ADGRB3O60242 1522 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 ZAP70P43403 619 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 STAT2P52630 851 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 KDM2BQ8NHM5 1336 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 MED23Q9ULK4 1368 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 N4BP1O75113 896 aaKnown RBP12.52□□□□□ -0.41
FN1-204ENST00000356005 ZSCAN10Q96SZ4 725 aaPredicted RBP12.52□□□□□ -0.41
FN1-204ENST00000356005 MED10Q9BTT4 135 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 PI4KBQ9UBF8 816 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 PCDHA12Q9UN75 941 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 JCADQ9P266 1359 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 ABCA9Q8IUA7 1624 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 SMCO2A6NFE2 343 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 CRCPO75575 148 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 GNAT1P11488 350 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 PTGS1P23219 599 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 KLHL40Q2TBA0 621 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 TPH2Q8IWU9 490 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 RNF123Q5XPI4 1314 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 TNNI1P19237 187 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.41
FN1-204ENST00000356005 DCUN1D2Q6PH85 259 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 GLI2P10070 1586 aa12.52□□□□□ -0.41
FN1-204ENST00000356005 OATP04181 439 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 ATP5DP30049 168 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 KRT24Q2M2I5 525 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 COA7Q96BR5 231 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 TRMT1Q9NXH9 659 aaKnown RBP12.51□□□□□ -0.41
FN1-204ENST00000356005 LRWD1Q9UFC0 647 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 RIMBP3CA6NJZ7 1639 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 RIMBP3BA6NNM3 1639 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 RIMBP3Q9UFD9 1639 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 CDK12Q9NYV4 1490 aaPredicted RBP12.51□□□□□ -0.41
FN1-204ENST00000356005 CACNA1FO60840 1977 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 PFDN6O15212 129 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 CCND2P30279 289 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
FN1-204ENST00000356005 GCNAQ96QF7 691 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.51□□□□□ -0.411e-65■□□□□ 8.5
FN1-204ENST00000356005 V9GYY5 206 aaPredicted RBP12.51□□□□□ -0.41
FN1-204ENST00000356005 ZSCAN20P17040 1043 aaPredicted RBP12.51□□□□□ -0.41
FN1-204ENST00000356005 LIG4P49917 911 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 PDE8BO95263 885 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 PTPREP23469 700 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 CUL4BQ13620 913 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 PALLDQ8WX93 1383 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 USP17L12C9JPN9 530 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 USP17L21D6R901 530 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 TUBBP07437 444 aa12.51□□□□□ -0.41
FN1-204ENST00000356005 DNM1Q05193 864 aaKnown RBP12.51□□□□□ -0.41
FN1-204ENST00000356005 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
FN1-204ENST00000356005 SPATA31A6Q5VVP1 1343 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 ZBTB7BO15156 539 aaPredicted RBP12.5□□□□□ -0.41
FN1-204ENST00000356005 DDAH1O94760 285 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 MIS18BP1Q6P0N0 1132 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 COA1Q9GZY4 146 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 SPOPO43791 374 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 POLR2DO15514 142 aaKnown RBP12.5□□□□□ -0.41
FN1-204ENST00000356005 GRIN3BO60391 1043 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 EXOC3O60645 756 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 ASIC2Q16515 512 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 ERCC6LQ2NKX8 1250 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 SMC5Q8IY18 1101 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 ESPNB1AK53 854 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 CALCOCO2Q13137 446 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 MAEAQ7L5Y9 396 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 ANKS4BQ8N8V4 417 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 GIMAP8Q8ND71 665 aaPredicted RBP12.5□□□□□ -0.41
FN1-204ENST00000356005 ATP6V0A1Q93050 837 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 HAUS1Q96CS2 278 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 ANO1Q5XXA6 986 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 IPO4Q8TEX9 1081 aaKnown RBP12.5□□□□□ -0.41
FN1-204ENST00000356005 KANSL2Q9H9L4 492 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 DACT1Q9NYF0 836 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 GIMAP6Q6P9H5 292 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 G2E3Q7L622 706 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 SRRTQ9BXP5 876 aaKnown RBP12.5□□□□□ -0.41
FN1-204ENST00000356005 ATG3Q9NT62 314 aa12.5□□□□□ -0.41
FN1-204ENST00000356005 CAPN9O14815 690 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 SYT1P21579 422 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 TNNC1P63316 161 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 PDZD4Q76G19 769 aaPredicted RBP12.49□□□□□ -0.41
FN1-204ENST00000356005 AOPEPQ8N6M6 819 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 LEO1Q8WVC0 666 aaPredicted RBP12.49□□□□□ -0.41
FN1-204ENST00000356005 ASAP1Q9ULH1 1129 aa12.49□□□□□ -0.41
FN1-204ENST00000356005 CARMIL3Q8ND23 1372 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms