RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 CTAGE9A4FU28 777 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 SH2B2O14492 632 aaPredicted RBP17.13■□□□□ 0.33
STRN3-201ENST00000355683 IQCB1Q15051 598 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 ZNF772Q68DY9 489 aaPredicted RBP17.13■□□□□ 0.33
STRN3-201ENST00000355683 LUC7L2Q9Y383 392 aaKnown RBP17.13■□□□□ 0.33
STRN3-201ENST00000355683 CXCR5P32302 372 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 LRRC41Q15345 812 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 TMTC2Q8N394 836 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 TRIM49BA6NDI0 452 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 GOLGA6L10A6NI86 522 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 APBA3O96018 575 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 FCHSD1Q86WN1 690 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 NELFBQ8WX92 580 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 HPS3Q969F9 1004 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 KMT5BQ4FZB7 885 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 CSGALNACT2Q8N6G5 542 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 SLC39A2Q9NP94 309 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 MAN1B1Q9UKM7 699 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 PXDNQ92626 1479 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 UFL1O94874 794 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 CALM1P0DP23 149 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 CALM2P0DP24 149 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 CALM3P0DP25 149 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 SP4Q02446 784 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 RBL2Q08999 1139 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 MARCH10Q8NA82 808 aaPredicted RBP17.12■□□□□ 0.33
STRN3-201ENST00000355683 SHPRHQ149N8 1683 aa17.12■□□□□ 0.33
STRN3-201ENST00000355683 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.11■□□□□ 0.33
STRN3-201ENST00000355683 TEX11Q8IYF3 940 aa17.11■□□□□ 0.33
STRN3-201ENST00000355683 CELF1Q92879 486 aaKnown RBP17.11■□□□□ 0.33
STRN3-201ENST00000355683 SMIM23A6NLE4 172 aa17.11■□□□□ 0.33
STRN3-201ENST00000355683 PSMA7O14818 248 aa17.11■□□□□ 0.33
STRN3-201ENST00000355683 CHMP2AO43633 222 aa17.11■□□□□ 0.33
STRN3-201ENST00000355683 RPS8P62241 208 aaKnown RBP17.11■□□□□ 0.33
STRN3-201ENST00000355683 RGS22Q8NE09 1264 aa17.11■□□□□ 0.33
STRN3-201ENST00000355683 CDR1P51861 262 aa17.11■□□□□ 0.33
STRN3-201ENST00000355683 CHMP4BP1P59074 171 aa17.11■□□□□ 0.33
STRN3-201ENST00000355683 TPTE2Q6XPS3 522 aa17.11■□□□□ 0.33
STRN3-201ENST00000355683 PLA2G4DQ86XP0 818 aa17.11■□□□□ 0.33
STRN3-201ENST00000355683 CLEC10AQ8IUN9 316 aa17.11■□□□□ 0.33
STRN3-201ENST00000355683 MB21D2Q8IYB1 491 aaPredicted RBP17.11■□□□□ 0.33
STRN3-201ENST00000355683 CCDC42Q96M95 316 aa17.11■□□□□ 0.33
STRN3-201ENST00000355683 ZSCAN10Q96SZ4 725 aaPredicted RBP17.11■□□□□ 0.33
STRN3-201ENST00000355683 IFT172Q9UG01 1749 aa17.11■□□□□ 0.33
STRN3-201ENST00000355683 FAM196BA6NMK8 535 aa17.1■□□□□ 0.33
STRN3-201ENST00000355683 ZEB2O60315 1214 aa17.1■□□□□ 0.33
STRN3-201ENST00000355683 EXOSC10Q01780 885 aaKnown RBP17.1■□□□□ 0.33
STRN3-201ENST00000355683 CALML4Q96GE6 196 aa17.1■□□□□ 0.33
STRN3-201ENST00000355683 BAG3O95817 575 aa17.1■□□□□ 0.33
STRN3-201ENST00000355683 ARID4AP29374 1257 aaPredicted RBP17.1■□□□□ 0.33
STRN3-201ENST00000355683 OAS2P29728 719 aaKnown RBP17.1■□□□□ 0.33
STRN3-201ENST00000355683 USP17L2Q6R6M4 530 aa17.1■□□□□ 0.33
STRN3-201ENST00000355683 MROH7-TTC4A0A0A0MT08 1334 aa17.1■□□□□ 0.33
STRN3-201ENST00000355683 HGSO14964 777 aaPredicted RBP17.1■□□□□ 0.33
STRN3-201ENST00000355683 SNAP25P60880 206 aa17.1■□□□□ 0.33
STRN3-201ENST00000355683 USH1GQ495M9 461 aa17.1■□□□□ 0.33
STRN3-201ENST00000355683 GOLGA1Q92805 767 aa17.1■□□□□ 0.33
STRN3-201ENST00000355683 POLR3EQ9NVU0 708 aa17.1■□□□□ 0.33
STRN3-201ENST00000355683 RTCBQ9Y3I0 505 aaKnown RBP17.1■□□□□ 0.33
STRN3-201ENST00000355683 UBN2Q6ZU65 1347 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 SRGAP2O75044 1071 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 SLC16A2P36021 539 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 SSR1P43307 286 aaKnown RBP17.09■□□□□ 0.33
STRN3-201ENST00000355683 MNAT1P51948 309 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 DOK7Q18PE1 504 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 MSL1Q68DK7 614 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 TYW1BQ6NUM6 668 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 KANK3Q6NY19 840 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 KRT27Q7Z3Y8 459 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 GJD4Q96KN9 370 aaPredicted RBP17.09■□□□□ 0.33
STRN3-201ENST00000355683 GOPCQ9HD26 462 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 EVX2Q03828 476 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 FMR1Q06787 632 aaKnown RBP eCLIP17.09■□□□□ 0.335e-12■■■■□ 23.2
STRN3-201ENST00000355683 CACNB3P54284 484 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 PNMA1Q8ND90 353 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 WDR24Q96S15 920 aa17.09■□□□□ 0.33
STRN3-201ENST00000355683 NOC4LQ9BVI4 516 aaKnown RBP17.09■□□□□ 0.33
STRN3-201ENST00000355683 ARHGAP6O43182 974 aa17.08■□□□□ 0.33
STRN3-201ENST00000355683 RDH13Q8NBN7 331 aa17.08■□□□□ 0.33
STRN3-201ENST00000355683 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.33
STRN3-201ENST00000355683 GJA10Q969M2 543 aa17.08■□□□□ 0.33
STRN3-201ENST00000355683 GBP3Q9H0R5 595 aa17.08■□□□□ 0.33
STRN3-201ENST00000355683 TRAF5O00463 557 aa17.08■□□□□ 0.32
STRN3-201ENST00000355683 CLCN6P51797 869 aa17.08■□□□□ 0.32
STRN3-201ENST00000355683 E4F1Q66K89 784 aaPredicted RBP17.08■□□□□ 0.32
STRN3-201ENST00000355683 SLC35F6Q8N357 371 aa17.08■□□□□ 0.32
STRN3-201ENST00000355683 TRIM31Q9BZY9 425 aa17.08■□□□□ 0.32
STRN3-201ENST00000355683 DCAF17Q5H9S7 520 aaPredicted RBP17.08■□□□□ 0.32
STRN3-201ENST00000355683 NCAPH2Q6IBW4 605 aa17.08■□□□□ 0.32
STRN3-201ENST00000355683 BUB1O43683 1085 aa17.07■□□□□ 0.32
STRN3-201ENST00000355683 GTF2IP78347 998 aa17.07■□□□□ 0.32
STRN3-201ENST00000355683 PAK1Q13153 545 aa17.07■□□□□ 0.32
STRN3-201ENST00000355683 RBM26Q5T8P6 1007 aaKnown RBP17.07■□□□□ 0.32
STRN3-201ENST00000355683 FUCA2Q9BTY2 467 aa17.07■□□□□ 0.32
STRN3-201ENST00000355683 KLRK1P26718 216 aa17.07■□□□□ 0.32
STRN3-201ENST00000355683 ADAT2Q7Z6V5 191 aaKnown RBP17.07■□□□□ 0.32
STRN3-201ENST00000355683 COL15A1P39059 1388 aa17.07■□□□□ 0.32
STRN3-201ENST00000355683 CEMIPQ8WUJ3 1361 aa17.07■□□□□ 0.32
STRN3-201ENST00000355683 SPATA31A6Q5VVP1 1343 aa17.07■□□□□ 0.32
STRN3-201ENST00000355683 SHTN1A0MZ66 631 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms