RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 CALM3P0DP25 149 aa20.54■□□□□ 0.88
PDZD3-202ENST00000355547 FNBP4Q8N3X1 1017 aaPredicted RBP20.54■□□□□ 0.88
PDZD3-202ENST00000355547 EPC1Q9H2F5 836 aa20.54■□□□□ 0.88
PDZD3-202ENST00000355547 ITIH6Q6UXX5 1313 aa20.54■□□□□ 0.88
PDZD3-202ENST00000355547 MFAP3LO75121 409 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 PRDM1O75626 825 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 CYP2C19P33261 490 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 STX17P56962 302 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 ATP2C1P98194 919 aaPredicted RBP20.53■□□□□ 0.88
PDZD3-202ENST00000355547 IFIT1BQ5T764 474 aaKnown RBP20.53■□□□□ 0.88
PDZD3-202ENST00000355547 KLHL10Q6JEL2 608 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 RASGRP2Q7LDG7 609 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 IPO4Q8TEX9 1081 aaKnown RBP20.53■□□□□ 0.88
PDZD3-202ENST00000355547 CCDC12Q8WUD4 166 aaPredicted RBP20.53■□□□□ 0.88
PDZD3-202ENST00000355547 GOLGA1Q92805 767 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 CCDC51Q96ER9 411 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 PARD6BQ9BYG5 372 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 USP21Q9UK80 565 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 AFF2P51816 1311 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 DUOX1Q9NRD9 1551 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 LRRC10BA6NIK2 292 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 CASP1P29466 404 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 FILIP1LQ4L180 1135 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 TEX35Q5T0J7 233 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 BRMS1Q9HCU9 246 aa20.53■□□□□ 0.88
PDZD3-202ENST00000355547 CCDC66A2RUB6 948 aa20.52■□□□□ 0.88
PDZD3-202ENST00000355547 SASH3O75995 380 aa20.52■□□□□ 0.88
PDZD3-202ENST00000355547 DDAH1O94760 285 aa20.52■□□□□ 0.88
PDZD3-202ENST00000355547 E2F4Q16254 413 aa20.52■□□□□ 0.88
PDZD3-202ENST00000355547 TTC38Q5R3I4 469 aa20.52■□□□□ 0.88
PDZD3-202ENST00000355547 JAKMIP3Q5VZ66 844 aa20.52■□□□□ 0.88
PDZD3-202ENST00000355547 TMTC3Q6ZXV5 915 aa20.52■□□□□ 0.88
PDZD3-202ENST00000355547 CDC5LQ99459 802 aaKnown RBP20.52■□□□□ 0.88
PDZD3-202ENST00000355547 ZNF174Q15697 407 aa20.52■□□□□ 0.88
PDZD3-202ENST00000355547 IQCA1Q86XH1 822 aa20.52■□□□□ 0.88
PDZD3-202ENST00000355547 IRX2Q9BZI1 471 aaPredicted RBP20.52■□□□□ 0.88
PDZD3-202ENST00000355547 GNL3LQ9NVN8 582 aaKnown RBP20.52■□□□□ 0.88
PDZD3-202ENST00000355547 ABCF2Q9UG63 623 aa20.52■□□□□ 0.88
PDZD3-202ENST00000355547 hCG_1642624A0A1W2PR95 340 aa20.51■□□□□ 0.87
PDZD3-202ENST00000355547 TXLNAP40222 546 aa20.51■□□□□ 0.87
PDZD3-202ENST00000355547 TUBB2AQ13885 445 aa20.51■□□□□ 0.87
PDZD3-202ENST00000355547 CNGA4Q8IV77 575 aa20.51■□□□□ 0.87
PDZD3-202ENST00000355547 TUBB2BQ9BVA1 445 aa20.51■□□□□ 0.87
PDZD3-202ENST00000355547 ARFGAP3Q9NP61 516 aa20.51■□□□□ 0.87
PDZD3-202ENST00000355547 LIMA1Q9UHB6 759 aaKnown RBP20.51■□□□□ 0.87
PDZD3-202ENST00000355547 IQSEC3Q9UPP2 1182 aaPredicted RBP20.51■□□□□ 0.87
PDZD3-202ENST00000355547 CRKLP46109 303 aaKnown RBP20.51■□□□□ 0.87
PDZD3-202ENST00000355547 PTGDRQ13258 359 aa20.51■□□□□ 0.87
PDZD3-202ENST00000355547 NOM1Q5C9Z4 860 aaKnown RBP20.51■□□□□ 0.87
PDZD3-202ENST00000355547 SMYD4Q8IYR2 804 aaPredicted RBP20.51■□□□□ 0.87
PDZD3-202ENST00000355547 XDHP47989 1333 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 GYPCP04921 128 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 TRAPPC10P48553 1259 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 SLC20A2Q08357 652 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 SRGAP1Q7Z6B7 1085 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 IQUBQ8NA54 791 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 CICQ96RK0 1608 aaPredicted RBP20.5■□□□□ 0.87
PDZD3-202ENST00000355547 CACNA1SQ13698 1873 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 CNTNAP5Q8WYK1 1306 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 COL1A1P02452 1464 aaPredicted RBP20.5■□□□□ 0.87
PDZD3-202ENST00000355547 CYP2D7A0A087X1C5 515 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 KIF5CO60282 957 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 CASP14P31944 242 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 UBE4AQ14139 1066 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 CPLX3Q8WVH0 158 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 PYM1Q9BRP8 204 aaKnown RBP20.5■□□□□ 0.87
PDZD3-202ENST00000355547 FUT8Q9BYC5 575 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 LZTFL1Q9NQ48 299 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.5■□□□□ 0.87
PDZD3-202ENST00000355547 CDC23Q9UJX2 597 aa20.5■□□□□ 0.87
PDZD3-202ENST00000355547 GYG1P46976 350 aa20.49■□□□□ 0.87
PDZD3-202ENST00000355547 DYNLL1P63167 89 aaKnown RBP20.49■□□□□ 0.87
PDZD3-202ENST00000355547 PDXDC2PQ6P474 469 aa20.49■□□□□ 0.87
PDZD3-202ENST00000355547 CTR9Q6PD62 1173 aa20.49■□□□□ 0.87
PDZD3-202ENST00000355547 NIP7Q9Y221 180 aaKnown RBP eCLIP20.49■□□□□ 0.87
PDZD3-202ENST00000355547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.49■□□□□ 0.87
PDZD3-202ENST00000355547 LAMB2P55268 1798 aa20.49■□□□□ 0.87
PDZD3-202ENST00000355547 CCDC151A5D8V7 595 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 FXR1P51114 621 aaKnown RBP eCLIP20.48■□□□□ 0.87
PDZD3-202ENST00000355547 BRD3Q15059 726 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 SRBD1Q8N5C6 995 aaKnown RBP20.48■□□□□ 0.87
PDZD3-202ENST00000355547 ZNF384Q8TF68 577 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 RWDD2AQ9UIY3 292 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 MYH2Q9UKX2 1941 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 DLEC1Q9Y238 1755 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 SPATA31A1Q5TZJ5 1347 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 A0A0U1RQJ8 604 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 GTPBP6O43824 516 aaPredicted RBP20.48■□□□□ 0.87
PDZD3-202ENST00000355547 ORC4O43929 436 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 CHMP4BP1P59074 171 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 KRT31Q15323 416 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 TMTC1Q8IUR5 882 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 ATRIPQ8WXE1 791 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 TTF2Q9UNY4 1162 aaKnown RBP20.48■□□□□ 0.87
PDZD3-202ENST00000355547 CTNND2Q9UQB3 1225 aa20.48■□□□□ 0.87
PDZD3-202ENST00000355547 TUBB4BP68371 445 aa20.47■□□□□ 0.87
PDZD3-202ENST00000355547 CEP112Q8N8E3 955 aa20.47■□□□□ 0.87
PDZD3-202ENST00000355547 MTRQ99707 1265 aa20.47■□□□□ 0.87
PDZD3-202ENST00000355547 COL4A1P02462 1669 aa20.47■□□□□ 0.87
PDZD3-202ENST00000355547 KAT6BQ8WYB5 2073 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms