RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 SNHG28P0DPA3 235 aa11.16□□□□□ -0.62
NPHP1-202ENST00000355301 GNAQP50148 359 aa11.16□□□□□ -0.62
NPHP1-202ENST00000355301 JAG1P78504 1218 aa11.16□□□□□ -0.62
NPHP1-202ENST00000355301 SEPT2Q15019 361 aa11.16□□□□□ -0.62
NPHP1-202ENST00000355301 FOXD4L5Q5VV16 416 aaPredicted RBP11.16□□□□□ -0.62
NPHP1-202ENST00000355301 CCDC82Q8N4S0 544 aa11.16□□□□□ -0.62
NPHP1-202ENST00000355301 SRBD1Q8N5C6 995 aaKnown RBP11.16□□□□□ -0.62
NPHP1-202ENST00000355301 FBXO18Q8NFZ0 1043 aa11.16□□□□□ -0.62
NPHP1-202ENST00000355301 FOXD4L4Q8WXT5 416 aaPredicted RBP11.16□□□□□ -0.62
NPHP1-202ENST00000355301 WASF1Q92558 559 aa11.16□□□□□ -0.62
NPHP1-202ENST00000355301 ATP6V1DQ9Y5K8 247 aa11.16□□□□□ -0.62
NPHP1-202ENST00000355301 PHF20L1A8MW92 1017 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 PRPF3O43395 683 aaKnown RBP11.15□□□□□ -0.62
NPHP1-202ENST00000355301 PDHBP11177 359 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 EEF2P13639 858 aaKnown RBP11.15□□□□□ -0.62
NPHP1-202ENST00000355301 ICA1Q05084 483 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 SIAH1Q8IUQ4 282 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 C8orf76Q96K31 380 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 LZTS2Q9BRK4 669 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 ALG1Q9BT22 464 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 SYNPO2Q9UMS6 1093 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 CNTNAP5Q8WYK1 1306 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 SCN4AP35499 1836 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 PARP1P09874 1014 aaKnown RBP11.15□□□□□ -0.62
NPHP1-202ENST00000355301 MYH6P13533 1939 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 SMARCA1P28370 1054 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 MCM4P33991 863 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 CAP2P40123 477 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 NBPF12Q5TAG4 269 aaPredicted RBP11.15□□□□□ -0.62
NPHP1-202ENST00000355301 USP50Q70EL3 339 aaPredicted RBP11.15□□□□□ -0.62
NPHP1-202ENST00000355301 LRRC47Q8N1G4 583 aaKnown RBP11.15□□□□□ -0.62
NPHP1-202ENST00000355301 STAG2Q8N3U4 1231 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 HOOK2Q96ED9 719 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 ZBTB21Q9ULJ3 1066 aa11.15□□□□□ -0.62
NPHP1-202ENST00000355301 UBE2Q2LH0YL09 131 aa11.14□□□□□ -0.63
NPHP1-202ENST00000355301 AKAP17AQ02040 695 aaKnown RBP11.14□□□□□ -0.63
NPHP1-202ENST00000355301 USP17L2Q6R6M4 530 aa11.14□□□□□ -0.63
NPHP1-202ENST00000355301 AIFM3Q96NN9 605 aa11.14□□□□□ -0.63
NPHP1-202ENST00000355301 ZSCAN16Q9H4T2 348 aaPredicted RBP11.14□□□□□ -0.63
NPHP1-202ENST00000355301 RBM27Q9P2N5 1060 aaKnown RBP11.14□□□□□ -0.63
NPHP1-202ENST00000355301 V9GY48 417 aaPredicted RBP11.14□□□□□ -0.63
NPHP1-202ENST00000355301 USP17L5A8MUK1 530 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 KLRF2D3W0D1 207 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 ASNSP08243 561 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 ATP2B2Q01814 1243 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 PKN1Q16512 942 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 ASPRV1Q53RT3 343 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 DCAF15Q66K64 600 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 RASGRP2Q7LDG7 609 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 FERMT3Q86UX7 667 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 GMCL1P1Q8NEA9 526 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 ZC3H15Q8WU90 426 aaKnown RBP11.13□□□□□ -0.63
NPHP1-202ENST00000355301 SPZ1Q9BXG8 430 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 GINM1Q9NU53 330 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 MTMR7Q9Y216 660 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 POLR2AP24928 1970 aaKnown RBP11.13□□□□□ -0.63
NPHP1-202ENST00000355301 ATAD5Q96QE3 1844 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 WDR90Q96KV7 1748 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 IQCA1LA6NCM1 817 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 CYTH3O43739 400 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 CTNND1O60716 968 aaKnown RBP11.13□□□□□ -0.63
NPHP1-202ENST00000355301 GOLGA8HP0CJ92 632 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 EPHX2P34913 555 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 FOSBP53539 338 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 ZNF543Q08ER8 600 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 RESTQ13127 1097 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 KRT40Q6A162 431 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 DCPSQ96C86 337 aaKnown RBP11.13□□□□□ -0.63
NPHP1-202ENST00000355301 GJB4Q9NTQ9 266 aa11.13□□□□□ -0.63
NPHP1-202ENST00000355301 DDX11L8A8MPP1 907 aa11.12□□□□□ -0.63
NPHP1-202ENST00000355301 GUCY1B3Q02153 619 aa11.12□□□□□ -0.63
NPHP1-202ENST00000355301 TRIM29Q14134 588 aa11.12□□□□□ -0.63
NPHP1-202ENST00000355301 PFKFB3Q16875 520 aaPredicted RBP11.12□□□□□ -0.63
NPHP1-202ENST00000355301 SLC35G1Q2M3R5 365 aa11.12□□□□□ -0.63
NPHP1-202ENST00000355301 SUPT20HL1Q3ZLR7 823 aa11.12□□□□□ -0.63
NPHP1-202ENST00000355301 GPATCH4Q5T3I0 446 aaKnown RBP11.12□□□□□ -0.63
NPHP1-202ENST00000355301 OTUD7BQ6GQQ9 843 aa11.12□□□□□ -0.63
NPHP1-202ENST00000355301 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
NPHP1-202ENST00000355301 ZNF341Q9BYN7 854 aa11.12□□□□□ -0.63
NPHP1-202ENST00000355301 ARHGEF10LQ9HCE6 1279 aa11.12□□□□□ -0.63
NPHP1-202ENST00000355301 ZNF112Q9UJU3 913 aa11.12□□□□□ -0.63
NPHP1-202ENST00000355301 SSC5DA1L4H1 1573 aa11.12□□□□□ -0.63
NPHP1-202ENST00000355301 A0A1W2PRG0 241 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 POTECB2RU33 542 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 F5H6K3 240 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 GOLGA6L22H0YM25 854 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 SCG2P13521 617 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 XBP1P17861 261 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 KLRC3Q07444 240 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 PRAMEF18Q5VWM3 479 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 SLFN13Q68D06 897 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 SULF1Q8IWU6 871 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 GMCL1Q96IK5 515 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 CHAMP1Q96JM3 812 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 TAF1DQ9H5J8 278 aaPredicted RBP11.11□□□□□ -0.63
NPHP1-202ENST00000355301 RIOX1Q9H6W3 641 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 TMX2Q9Y320 296 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 hCG_1642624A0A1W2PR95 340 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 MMP1P03956 469 aa11.11□□□□□ -0.63
NPHP1-202ENST00000355301 KIF23Q02241 960 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms