RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 SRGAP3O43295 1099 aa19.43■□□□□ 0.7
DDX55-202ENST00000354291 ADGRA1Q86SQ6 560 aa19.43■□□□□ 0.7
DDX55-202ENST00000354291 KIAA1683Q9H0B3 1180 aa19.43■□□□□ 0.7
DDX55-202ENST00000354291 SLC5A4Q9NY91 659 aa19.43■□□□□ 0.7
DDX55-202ENST00000354291 PHF24Q9UPV7 400 aa19.43■□□□□ 0.7
DDX55-202ENST00000354291 UQCRFS1P1P0C7P4 283 aa19.42■□□□□ 0.7
DDX55-202ENST00000354291 ERCC3P19447 782 aa19.42■□□□□ 0.7
DDX55-202ENST00000354291 XPNPEP3Q9NQH7 507 aa19.42■□□□□ 0.7
DDX55-202ENST00000354291 GRXCR1A8MXD5 290 aa19.41■□□□□ 0.7
DDX55-202ENST00000354291 PGK1P00558 417 aa19.41■□□□□ 0.7
DDX55-202ENST00000354291 RARBP10826 455 aa19.41■□□□□ 0.7
DDX55-202ENST00000354291 IGFBP4P22692 258 aa19.41■□□□□ 0.7
DDX55-202ENST00000354291 PBX2P40425 430 aa19.41■□□□□ 0.7
DDX55-202ENST00000354291 DYNLL1P63167 89 aaKnown RBP19.41■□□□□ 0.7
DDX55-202ENST00000354291 ABCB5Q2M3G0 1257 aa19.41■□□□□ 0.7
DDX55-202ENST00000354291 ALDH1L2Q3SY69 923 aa19.41■□□□□ 0.7
DDX55-202ENST00000354291 CERKLQ49MI3 558 aaPredicted RBP19.41■□□□□ 0.7
DDX55-202ENST00000354291 AKNAD1Q5T1N1 836 aa19.41■□□□□ 0.7
DDX55-202ENST00000354291 RNF180Q86T96 592 aa19.41■□□□□ 0.7
DDX55-202ENST00000354291 SMC4Q9NTJ3 1288 aa19.41■□□□□ 0.7
DDX55-202ENST00000354291 HOXC10Q9NYD6 342 aa19.41■□□□□ 0.7
DDX55-202ENST00000354291 SIPA1L1O43166 1804 aa19.41■□□□□ 0.7
DDX55-202ENST00000354291 PLS1Q14651 629 aa19.4■□□□□ 0.7
DDX55-202ENST00000354291 COG2Q14746 738 aa19.4■□□□□ 0.7
DDX55-202ENST00000354291 TATDN1Q6P1N9 297 aa19.4■□□□□ 0.7
DDX55-202ENST00000354291 SLC44A5Q8NCS7 719 aa19.4■□□□□ 0.7
DDX55-202ENST00000354291 MEIS3Q99687 375 aa19.4■□□□□ 0.7
DDX55-202ENST00000354291 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.4■□□□□ 0.77e-8■■■□□ 15.9
DDX55-202ENST00000354291 SPATC1LQ9H0A9 340 aa19.4■□□□□ 0.7
DDX55-202ENST00000354291 CABP5Q9NP86 173 aa19.4■□□□□ 0.7
DDX55-202ENST00000354291 HOXD11P31277 338 aaPredicted RBP19.39■□□□□ 0.69
DDX55-202ENST00000354291 FAAP100Q0VG06 881 aa19.39■□□□□ 0.69
DDX55-202ENST00000354291 NCAPG2Q86XI2 1143 aa19.39■□□□□ 0.69
DDX55-202ENST00000354291 CDCA7LQ96GN5 454 aa19.39■□□□□ 0.69
DDX55-202ENST00000354291 PBX4Q9BYU1 374 aa19.39■□□□□ 0.69
DDX55-202ENST00000354291 CHD9Q3L8U1 2897 aa19.39■□□□□ 0.69
DDX55-202ENST00000354291 A0A1W2PQ45 241 aaPredicted RBP19.38■□□□□ 0.69
DDX55-202ENST00000354291 A0A1W2PQY0 241 aa19.38■□□□□ 0.69
DDX55-202ENST00000354291 DCDC2CA8MYV0 355 aa19.38■□□□□ 0.69
DDX55-202ENST00000354291 CT47B1P0C2W7 299 aaPredicted RBP19.38■□□□□ 0.69
DDX55-202ENST00000354291 USP5P45974 858 aa19.38■□□□□ 0.69
DDX55-202ENST00000354291 TTC39AQ5SRH9 613 aa19.38■□□□□ 0.69
DDX55-202ENST00000354291 TRMT2AQ8IZ69 625 aaKnown RBP19.38■□□□□ 0.69
DDX55-202ENST00000354291 MAML3Q96JK9 1138 aa19.38■□□□□ 0.69
DDX55-202ENST00000354291 NECAB3Q96P71 396 aaPredicted RBP19.38■□□□□ 0.69
DDX55-202ENST00000354291 TANGO6Q9C0B7 1094 aa19.38■□□□□ 0.69
DDX55-202ENST00000354291 SERPINB13Q9UIV8 391 aa19.38■□□□□ 0.69
DDX55-202ENST00000354291 NOB1Q9ULX3 412 aaKnown RBP19.38■□□□□ 0.69
DDX55-202ENST00000354291 TIMP1P01033 207 aa19.37■□□□□ 0.69
DDX55-202ENST00000354291 ADGRE1Q14246 886 aa19.37■□□□□ 0.69
DDX55-202ENST00000354291 SHCBP1Q8NEM2 672 aa19.37■□□□□ 0.69
DDX55-202ENST00000354291 C1QTNF1Q9BXJ1 281 aa19.37■□□□□ 0.69
DDX55-202ENST00000354291 MROH8Q9H579 483 aa19.37■□□□□ 0.69
DDX55-202ENST00000354291 SMCHD1A6NHR9 2005 aa19.36■□□□□ 0.69
DDX55-202ENST00000354291 CYP2E1P05181 493 aaPredicted RBP19.36■□□□□ 0.69
DDX55-202ENST00000354291 CYP7A1P22680 504 aa19.36■□□□□ 0.69
DDX55-202ENST00000354291 G3BP1Q13283 466 aaKnown RBP eCLIP19.36■□□□□ 0.69
DDX55-202ENST00000354291 SAMD1Q6SPF0 538 aaPredicted RBP19.36■□□□□ 0.69
DDX55-202ENST00000354291 FCER1AP12319 257 aa19.35■□□□□ 0.69
DDX55-202ENST00000354291 TAL1P17542 331 aaPredicted RBP19.35■□□□□ 0.69
DDX55-202ENST00000354291 SEPT2Q15019 361 aa19.35■□□□□ 0.69
DDX55-202ENST00000354291 TMEM240Q5SV17 173 aa19.35■□□□□ 0.69
DDX55-202ENST00000354291 C16orf59Q7L2K0 433 aa19.35■□□□□ 0.69
DDX55-202ENST00000354291 ANKRD33Q7Z3H0 272 aa19.35■□□□□ 0.69
DDX55-202ENST00000354291 ABRAQ8N0Z2 381 aa19.35■□□□□ 0.69
DDX55-202ENST00000354291 MIGA1Q8NAN2 632 aa19.35■□□□□ 0.69
DDX55-202ENST00000354291 TOX2Q96NM4 488 aa19.35■□□□□ 0.69
DDX55-202ENST00000354291 STARD7Q9NQZ5 370 aa19.35■□□□□ 0.69
DDX55-202ENST00000354291 XIRP2A4UGR9 3374 aa19.34■□□□□ 0.69
DDX55-202ENST00000354291 MPHOSPH10O00566 681 aaKnown RBP19.34■□□□□ 0.69
DDX55-202ENST00000354291 ACRP10323 421 aa19.34■□□□□ 0.69
DDX55-202ENST00000354291 GUCY1A2P33402 732 aa19.34■□□□□ 0.69
DDX55-202ENST00000354291 PPIGQ13427 754 aaKnown RBP eCLIP19.34■□□□□ 0.694e-6■□□□□ 11.2
DDX55-202ENST00000354291 CCDC158Q5M9N0 1113 aa19.34■□□□□ 0.69
DDX55-202ENST00000354291 MFSD5Q6N075 450 aa19.34■□□□□ 0.69
DDX55-202ENST00000354291 CCDC174Q6PII3 467 aa19.34■□□□□ 0.69
DDX55-202ENST00000354291 TTC6Q86TZ1 520 aa19.34■□□□□ 0.69
DDX55-202ENST00000354291 LENG1Q96BZ8 264 aaPredicted RBP19.34■□□□□ 0.69
DDX55-202ENST00000354291 TSPYL2Q9H2G4 693 aaPredicted RBP19.34■□□□□ 0.69
DDX55-202ENST00000354291 MSRAQ9UJ68 235 aa19.34■□□□□ 0.69
DDX55-202ENST00000354291 A0A1W2PRG0 241 aa19.33■□□□□ 0.68
DDX55-202ENST00000354291 ACLYP53396 1101 aa19.33■□□□□ 0.68
DDX55-202ENST00000354291 MICALL1Q8N3F8 863 aa19.33■□□□□ 0.68
DDX55-202ENST00000354291 MB21D1Q8N884 522 aa19.33■□□□□ 0.68
DDX55-202ENST00000354291 NUP133Q8WUM0 1156 aa19.33■□□□□ 0.68
DDX55-202ENST00000354291 API5Q9BZZ5 524 aaKnown RBP19.33■□□□□ 0.68
DDX55-202ENST00000354291 EHD4Q9H223 541 aa19.33■□□□□ 0.68
DDX55-202ENST00000354291 PIH1D3Q9NQM4 214 aaKnown RBP19.33■□□□□ 0.68
DDX55-202ENST00000354291 NRBP1Q9UHY1 535 aa19.33■□□□□ 0.68
DDX55-202ENST00000354291 PGK2P07205 417 aa19.32■□□□□ 0.68
DDX55-202ENST00000354291 GNAI3P08754 354 aa19.32■□□□□ 0.68
DDX55-202ENST00000354291 DSG3P32926 999 aa19.32■□□□□ 0.68
DDX55-202ENST00000354291 SHMT1P34896 483 aa19.32■□□□□ 0.68
DDX55-202ENST00000354291 ZAP70P43403 619 aa19.32■□□□□ 0.68
DDX55-202ENST00000354291 PLCD1P51178 756 aa19.32■□□□□ 0.68
DDX55-202ENST00000354291 ZNF365Q70YC5 407 aa19.32■□□□□ 0.68
DDX55-202ENST00000354291 TINF2Q9BSI4 451 aa19.32■□□□□ 0.68
DDX55-202ENST00000354291 CHD7Q9P2D1 2997 aa19.32■□□□□ 0.68
DDX55-202ENST00000354291 APBB1O00213 710 aa19.31■□□□□ 0.68
DDX55-202ENST00000354291 FLOT1O75955 427 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms