RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 CD109Q6YHK3 1445 aa13□□□□□ -0.33
CDK5RAP2-201ENST00000349780 KRT2P35908 639 aa13□□□□□ -0.33
CDK5RAP2-201ENST00000349780 TMEM154Q6P9G4 183 aa13□□□□□ -0.33
CDK5RAP2-201ENST00000349780 VWA3AA6NCI4 1184 aa13□□□□□ -0.33
CDK5RAP2-201ENST00000349780 RXRAP19793 462 aa13□□□□□ -0.33
CDK5RAP2-201ENST00000349780 MIEF2Q96C03 454 aa13□□□□□ -0.33
CDK5RAP2-201ENST00000349780 MYD88Q99836 296 aa13□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CABP5Q9NP86 173 aa13□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CTDP1Q9Y5B0 961 aaPredicted RBP13□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CNGA1P29973 690 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CTCFP49711 727 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CCZ1BP86790 482 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CCZ1P86791 482 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 WTAPQ15007 396 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CCDC93Q567U6 631 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PEX26Q7Z412 305 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 OLFM3Q96PB7 478 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 TTC21AQ8NDW8 1320 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 GUCY1A3Q02108 690 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 MFSD6Q6ZSS7 791 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 COG1Q8WTW3 980 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CMA1P23946 247 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 GJC1P36383 396 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PRR16Q569H4 304 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 BICD1Q96G01 975 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 MIS12Q9H081 205 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 ZSWIM6Q9HCJ5 1215 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 LRP2BPQ9P2M1 347 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 INTUQ9ULD6 942 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 MAP3K2Q9Y2U5 619 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 TSC22D4Q9Y3Q8 395 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 I3L4J1 428 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PAPOLAP51003 745 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 VWA3BQ502W6 1294 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 VIPAS39Q9H9C1 493 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PALMDQ9NP74 551 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 ASIC3Q9UHC3 531 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 B4GALNT2Q8NHY0 566 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PANX2Q96RD6 677 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 KIAA0586Q9BVV6 1533 aa12.99□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PPIP5K1Q6PFW1 1433 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 RILPL1Q5EBL4 403 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 RRP36Q96EU6 259 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 RILPQ96NA2 401 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 TESK2Q96S53 571 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PLIN2Q99541 437 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 NPC1L1Q9UHC9 1359 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 KSR1Q8IVT5 923 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 RNF217Q8TC41 542 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 HOOK2Q96ED9 719 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 FAM227BQ96M60 508 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 DAAM1Q9Y4D1 1078 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 GNAT1P11488 350 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 OLFML2BQ68BL8 750 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 STOML1Q9UBI4 398 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 NFU1Q9UMS0 254 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 IRAK1P51617 712 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 MORC3Q14149 939 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 E4F1Q66K89 784 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CCDC105Q8IYK2 499 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 NSMCE1Q8WV22 266 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 TEKT4Q8WW24 435 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CUL5Q93034 780 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 SNRKQ9NRH2 765 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CLUL1Q15846 466 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 MYSM1Q5VVJ2 828 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PA2G4Q9UQ80 394 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP2-201ENST00000349780 COL17A1Q9UMD9 1497 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CYP2E1P05181 493 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 SPATA1Q5VX52 437 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 ZNF449Q6P9G9 518 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 FAM43BQ6ZT52 329 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 RRAGAQ7L523 313 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 ARHGAP22Q7Z5H3 698 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 UBL4BQ8N7F7 174 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 STMN1P16949 149 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 ARMCX5Q6P1M9 558 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 CYB5D1Q6P9G0 228 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 NYAP1Q6ZVC0 841 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 LRRC8CQ8TDW0 803 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 WDR24Q96S15 920 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 PRAG1Q86YV5 1406 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 KIF14Q15058 1648 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 A0A1W2PQ27 194 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 A0A1W2PQ64 194 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 A0A1W2PQD8 194 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 MMEP08473 750 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 ATP1A3P13637 1013 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 IL9RQ01113 521 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 ZNF530Q6P9A1 599 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
CDK5RAP2-201ENST00000349780 TRPA1O75762 1119 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms