RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 SCAND2PQ9GZW5 306 aaPredicted RBP13.64□□□□□ -0.23
CTNNB1-201ENST00000349496 PPP2R2CQ9Y2T4 447 aa13.64□□□□□ -0.23
CTNNB1-201ENST00000349496 ZNF711Q9Y462 761 aa13.64□□□□□ -0.23
CTNNB1-201ENST00000349496 CETN3O15182 167 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 PPP1R15BQ5SWA1 713 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 DHRS1Q96LJ7 313 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 CDHR2Q9BYE9 1310 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 BIN1O00499 593 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 EVI5O60447 810 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 FAM200BP0CF97 657 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 ODF2Q5BJF6 829 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 ZNF530Q6P9A1 599 aaPredicted RBP13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 TTC6Q86TZ1 520 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 TTC30AQ86WT1 665 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 CLSTN2Q9H4D0 955 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 CTDP1Q9Y5B0 961 aaPredicted RBP13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 A0A1B0GVL5 298 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 OPLAHO14841 1288 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 TMED1Q13445 227 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 Q6ZUG5 572 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 C15orf41Q9Y2V0 281 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 OVOS2A0A0J9YW53 1432 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 OVOS2Q6IE36 1432 aa13.63□□□□□ -0.23
CTNNB1-201ENST00000349496 CDC42BPGQ6DT37 1551 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 NDUFB5O43674 189 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 FNTAP49354 379 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 SDR16C5Q8N3Y7 309 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 HNRNPLLQ8WVV9 542 aaKnown RBP13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 OPTNQ96CV9 577 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 NR1H4Q96RI1 486 aaPredicted RBP13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 AXIN2Q9Y2T1 843 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 PEAK1Q9H792 1746 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 H3BQV1 296 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 NR1I2O75469 434 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 KIAA0753Q2KHM9 967 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 IFFO2Q5TF58 517 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 NAA16Q6N069 864 aaPredicted RBP13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 RSRC2Q7L4I2 434 aaKnown RBP13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 MAEAQ7L5Y9 396 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 ARHGAP18Q8N392 663 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 DESI2Q9BSY9 194 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 VCXQ9H320 206 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 FAM184BQ9ULE4 1060 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 FLT4P35916 1363 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 SPATA31D1Q6ZQQ2 1576 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 FGD4Q96M96 766 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 PREBQ9HCU5 417 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 MRGBPQ9NV56 204 aa13.62□□□□□ -0.23
CTNNB1-201ENST00000349496 STXBP3O00186 592 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 N4BP3O15049 544 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 SMNDC1O75940 238 aaKnown RBP eCLIP13.61□□□□□ -0.234e-7■■■□□ 17.2
CTNNB1-201ENST00000349496 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 CUL4AQ13619 759 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 TRIM50Q86XT4 487 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 EHBP1Q8NDI1 1231 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 VCX3BQ9H321 246 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 VCX3AQ9NNX9 186 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 CTAGE9A4FU28 777 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 LDHAP00338 332 aaKnown RBP13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 FOSBP53539 338 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 CBX3Q13185 183 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 CHRNA2Q15822 529 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 ARMCX5Q6P1M9 558 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 CCDC63Q8NA47 563 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 MTA3Q9BTC8 594 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 NPHP3Q7Z494 1330 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 A6NNZ2 444 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 HPDP32754 393 aaPredicted RBP13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 PTPN21Q16825 1174 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 TUBB8Q3ZCM7 444 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 GALNT15Q8N3T1 639 aa13.61□□□□□ -0.23
CTNNB1-201ENST00000349496 IGSF1Q8N6C5 1336 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 HSF2BPO75031 334 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 TEFQ10587 303 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 RCN1Q15293 331 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 EDC3Q96F86 508 aaKnown RBP13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 CUTAO60888 179 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 UBASH3AP57075 661 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 MYBPC3Q14896 1274 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 SH2D4BQ5SQS7 431 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 TTLL7Q6ZT98 887 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 SND1Q7KZF4 910 aaKnown RBP eCLIP13.6□□□□□ -0.238e-9■■■□□ 14.7
CTNNB1-201ENST00000349496 TBC1D1Q86TI0 1168 aaPredicted RBP13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 BTBD11A6QL63 1104 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 TUBB4BP68371 445 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 SARM1Q6SZW1 724 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 CPLX4Q7Z7G2 160 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 GBP5Q96PP8 586 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 CDC23Q9UJX2 597 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 CHMP2BQ9UQN3 213 aa13.6□□□□□ -0.23
CTNNB1-201ENST00000349496 MYCLP1P12525 358 aaPredicted RBP13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 CCT4P50991 539 aaKnown RBP13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 SLC44A4Q53GD3 710 aa13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 THEMISQ8N1K5 641 aaPredicted RBP13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 RASSF9O75901 435 aa13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 TRIM29Q14134 588 aa13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 HSP90AA4PQ58FG1 418 aa13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 GRAMD4Q6IC98 578 aa13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 LONP2Q86WA8 852 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms