RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ZKSCAN4Q969J2 545 aaPredicted RBP11.62□□□□□ -0.55
CHRNA1-202ENST00000348749 NBPF3Q9H094 633 aa11.62□□□□□ -0.55
CHRNA1-202ENST00000348749 GPHNQ9NQX3 736 aaPredicted RBP11.62□□□□□ -0.55
CHRNA1-202ENST00000348749 AKAP11Q9UKA4 1901 aa11.62□□□□□ -0.55
CHRNA1-202ENST00000348749 KCPQ6ZWJ8 1503 aa11.62□□□□□ -0.55
CHRNA1-202ENST00000348749 PPP1R12AO14974 1030 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 KIAA0754O94854 1291 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 RDXP35241 583 aaKnown RBP11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 RCAN1P53805 252 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 TRIM14Q14142 442 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 PLCB4Q15147 1175 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 UBE3CQ15386 1083 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 FILIP1LQ4L180 1135 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 WLSQ5T9L3 541 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 APOA5Q6Q788 366 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 OTUD6BQ8N6M0 293 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 AENQ8WTP8 325 aaKnown RBP11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 MIEF2Q96C03 454 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 FAM184BQ9ULE4 1060 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 TBC1D2BQ9UPU7 963 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 LRP6O75581 1613 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 OPA1O60313 960 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 CSF1RP07333 972 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 ADD2P35612 726 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 IARSP41252 1262 aaKnown RBP11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 FXR1P51114 621 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 HAND2P61296 217 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 MICALCLQ6ZW33 695 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 TBC1D22AQ8WUA7 517 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 CPLX3Q8WVH0 158 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 MMS19Q96T76 1030 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 EHD4Q9H223 541 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 ABHD10Q9NUJ1 306 aa11.61□□□□□ -0.55
CHRNA1-202ENST00000348749 DCCP43146 1447 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 H0YHG0 523 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 MYO1FO00160 1098 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 ZBTB43O43298 467 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 PCCAP05165 728 aaPredicted RBP11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 ZC3H6P61129 1189 aaKnown RBP11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 SAFBQ15424 915 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 NTRK3Q16288 839 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 ZNF662Q6ZS27 426 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 TTLL7Q6ZT98 887 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 PUS7LQ9H0K6 701 aaKnown RBP11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 HAUS4Q9H6D7 363 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 GGA2Q9UJY4 613 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 CEP131Q9UPN4 1083 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 CCDC9Q9Y3X0 531 aaKnown RBP11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 SAR1BQ9Y6B6 198 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 TIAM2Q8IVF5 1701 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 TNS2Q63HR2 1409 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 MYO5AQ9Y4I1 1855 aaKnown RBP11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 PCDH11XQ9BZA7 1347 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 PCDH11YQ9BZA8 1340 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 CHD4Q14839 1912 aa11.6□□□□□ -0.55
CHRNA1-202ENST00000348749 KIF3CO14782 793 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 CSB-PGBD3P0DP91 1061 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 MYBL2P10244 700 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 MRPL12P52815 198 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 TCIRG1Q13488 830 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 ZNF827Q17R98 1081 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 RILPL1Q5EBL4 403 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 FOXP1Q9H334 677 aaPredicted RBP11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 CNNM2Q9H8M5 875 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 VEZTQ9HBM0 779 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 SERTAD1Q9UHV2 236 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 SYNRGQ9UMZ2 1314 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 BCL9LQ86UU0 1499 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 NDUFAB1O14561 156 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 FMNL1O95466 1100 aaPredicted RBP11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 GCFC2P16383 781 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 IFNAR1P17181 557 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 ERCC3P19447 782 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 PTPREP23469 700 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 ZAP70P43403 619 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 PIP4K2AP48426 406 aaPredicted RBP11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 SMTNP53814 917 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 SSRP1Q08945 709 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 CUL4BQ13620 913 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 IQCEQ6IPM2 695 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 ANKRD18AQ8IVF6 992 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 NOSTRINQ8IVI9 506 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 IGDCC4Q8TDY8 1250 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 ZNF594Q96JF6 807 aaPredicted RBP11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 PUS3Q9BZE2 481 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 VCPKMTQ9H867 229 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 BCCIPQ9P287 314 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 SAMM50Q9Y512 469 aa11.59□□□□□ -0.55
CHRNA1-202ENST00000348749 ACTN4O43707 911 aaKnown RBP11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 RASSF9O75901 435 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 SCP2P22307 547 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 NF2P35240 595 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 IFIT5Q13325 482 aaKnown RBP11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 DRP2Q13474 957 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 ALS2CLQ60I27 953 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 STK11IPQ8N1F8 1099 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 EHBP1Q8NDI1 1231 aa11.58□□□□□ -0.56
CHRNA1-202ENST00000348749 CD248Q9HCU0 757 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms