RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 S100BP04271 92 aaPredicted RBP13.04□□□□□ -0.32
TRAF3-201ENST00000347662 NFKBIL1Q9UBC1 381 aaPredicted RBP13.04□□□□□ -0.32
TRAF3-201ENST00000347662 ABCA5Q8WWZ7 1642 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 BMP15O95972 392 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 ALDH1B1P30837 517 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 EYA2O00167 538 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 ACTN4O43707 911 aaKnown RBP13.03□□□□□ -0.32
TRAF3-201ENST00000347662 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 TBC1D2Q9BYX2 928 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 KRT81Q14533 505 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 CCDC68Q9H2F9 335 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 CCDC38Q502W7 563 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 TRIM68Q6AZZ1 485 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 GNGT2O14610 69 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 NVLO15381 856 aaKnown RBP13.03□□□□□ -0.32
TRAF3-201ENST00000347662 ATF5Q9Y2D1 282 aaPredicted RBP13.03□□□□□ -0.32
TRAF3-201ENST00000347662 CAPN9O14815 690 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 PYGLP06737 847 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 KIF11P52732 1056 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 BRD3Q15059 726 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 DLGAP5Q15398 846 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 XAGE2Q96GT9 111 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 DBNDD2Q9BQY9 259 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 TEKT2Q9UIF3 430 aa13.03□□□□□ -0.32
TRAF3-201ENST00000347662 FAM95CA0A1B0GW59 222 aa13.02□□□□□ -0.32
TRAF3-201ENST00000347662 SPAG1Q07617 926 aa13.02□□□□□ -0.32
TRAF3-201ENST00000347662 UBN1Q9NPG3 1134 aa13.02□□□□□ -0.32
TRAF3-201ENST00000347662 ANAPC5Q9UJX4 755 aa13.02□□□□□ -0.32
TRAF3-201ENST00000347662 ANGPTL3Q9Y5C1 460 aa13.02□□□□□ -0.32
TRAF3-201ENST00000347662 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.32
TRAF3-201ENST00000347662 C2CD5Q86YS7 1000 aa13.02□□□□□ -0.32
TRAF3-201ENST00000347662 MYLK4Q86YV6 388 aaPredicted RBP13.02□□□□□ -0.32
TRAF3-201ENST00000347662 METTL13Q8N6R0 699 aa13.02□□□□□ -0.32
TRAF3-201ENST00000347662 BCAP29Q9UHQ4 241 aa13.02□□□□□ -0.32
TRAF3-201ENST00000347662 TRAF5O00463 557 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 SLC4A1P02730 911 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 MAP3K7CLP57077 242 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 SMCR8Q8TEV9 937 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-201ENST00000347662 ORC6Q9Y5N6 252 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 SYNDIG1LA6NDD5 238 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 KCNQ3O43525 872 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 UBE2HP62256 183 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 MUM1Q2TAK8 710 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 GANCQ8TET4 914 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 NEUROG2Q9H2A3 272 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 B4E1Z4 1266 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 SND1Q7KZF4 910 aaKnown RBP eCLIP13.02□□□□□ -0.33
TRAF3-201ENST00000347662 RSAD2Q8WXG1 361 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 ATP6V0A1Q93050 837 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 LRGUKQ96M69 825 aa13.02□□□□□ -0.33
TRAF3-201ENST00000347662 CD19P15391 556 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 SCYL2Q6P3W7 929 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 PDE6BP35913 854 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 ZNF772Q68DY9 489 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-201ENST00000347662 CTAGE3PQ8IX95 158 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 TMX3Q96JJ7 454 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 FGD4Q96M96 766 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 TACO1Q9BSH4 297 aaKnown RBP13.01□□□□□ -0.33
TRAF3-201ENST00000347662 ARHGEF10LQ9HCE6 1279 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 PARP1P09874 1014 aaKnown RBP13.01□□□□□ -0.33
TRAF3-201ENST00000347662 DNM2P50570 870 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 ASIC2Q16515 512 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 ZNF449Q6P9G9 518 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 B4GALNT4Q76KP1 1039 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 SUCLA2Q9P2R7 463 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-201ENST00000347662 SOS1Q07889 1333 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-201ENST00000347662 PFDN6O15212 129 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 HDAC1Q13547 482 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-201ENST00000347662 ANKRD20A3Q5VUR7 823 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 MYO1AQ9UBC5 1043 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 TPX2Q9ULW0 747 aaKnown RBP13.01□□□□□ -0.33
TRAF3-201ENST00000347662 CTNND2Q9UQB3 1225 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 MYSM1Q5VVJ2 828 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 KRBA2Q6ZNG9 492 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 KIAA0825Q8IV33 1275 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 MAPKAPK5Q8IW41 473 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 WDR48Q8TAF3 677 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 RBM46Q8TBY0 533 aaKnown RBP13.01□□□□□ -0.33
TRAF3-201ENST00000347662 KCNG4Q8TDN1 519 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 AZI2Q9H6S1 392 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 FAM8A1Q9UBU6 413 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 ASAP1Q9ULH1 1129 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 KIF22Q14807 665 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 TRIM50Q86XT4 487 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 ST7Q9NRC1 585 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 SMYD2Q9NRG4 433 aa13.01□□□□□ -0.33
TRAF3-201ENST00000347662 FAF1Q9UNN5 650 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-201ENST00000347662 GIGYF1O75420 1035 aaPredicted RBP13□□□□□ -0.33
TRAF3-201ENST00000347662 PGBD1Q96JS3 809 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 VPS37BQ9H9H4 285 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 TTF2Q9UNY4 1162 aaKnown RBP13□□□□□ -0.33
TRAF3-201ENST00000347662 LOC102724428A0A0B4J2F2 783 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 CALUO43852 315 aaPredicted RBP13□□□□□ -0.33
TRAF3-201ENST00000347662 YARSP54577 528 aaKnown RBP13□□□□□ -0.33
TRAF3-201ENST00000347662 SIK1P57059 783 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 RPS8P62241 208 aaKnown RBP13□□□□□ -0.33
TRAF3-201ENST00000347662 FAM71BQ8TC56 605 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 TNPO1Q92973 898 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms