RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 DDIT3P35638 169 aa12.15□□□□□ -0.46
CLCN6-202ENST00000346436 ASIC1P78348 528 aa12.15□□□□□ -0.46
CLCN6-202ENST00000346436 NSUN7Q8NE18 718 aaKnown RBP12.15□□□□□ -0.46
CLCN6-202ENST00000346436 LBHD1Q9BQE6 289 aaPredicted RBP12.15□□□□□ -0.46
CLCN6-202ENST00000346436 KIFC2Q96AC6 838 aa12.15□□□□□ -0.46
CLCN6-202ENST00000346436 AATFQ9NY61 560 aaKnown RBP eCLIP12.15□□□□□ -0.46
CLCN6-202ENST00000346436 P4HA1P13674 534 aa12.15□□□□□ -0.47
CLCN6-202ENST00000346436 ECE1P42892 770 aa12.15□□□□□ -0.47
CLCN6-202ENST00000346436 FAM160B1Q5W0V3 765 aa12.15□□□□□ -0.47
CLCN6-202ENST00000346436 NSMCE1Q8WV22 266 aa12.15□□□□□ -0.47
CLCN6-202ENST00000346436 TTC14Q96N46 770 aa12.15□□□□□ -0.47
CLCN6-202ENST00000346436 VPS16Q9H269 839 aa12.15□□□□□ -0.47
CLCN6-202ENST00000346436 STX10O60499 249 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 BIRC3Q13489 604 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 ERCC6LQ2NKX8 1250 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 ADALQ6DHV7 355 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 CLEC17AQ6ZS10 378 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 ZBTB8OSQ8IWT0 167 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 JPH2Q9BR39 696 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-202ENST00000346436 GBP3Q9H0R5 595 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 CALCOCO1Q9P1Z2 691 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 CTNND2Q9UQB3 1225 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 ARAP3Q8WWN8 1544 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 CCDC169A6NNP5 214 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 FLOT1O75955 427 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 CTSWP56202 376 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 TOB2Q14106 344 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-202ENST00000346436 RNF169Q8NCN4 708 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 NFE2L3Q9Y4A8 694 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 V9GY48 417 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-202ENST00000346436 PSMA7O14818 248 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 MAPKAPK5Q8IW41 473 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 COPRSQ9NQ92 184 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 GOLGA6L7A0A1B0GV03 622 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 PSDA5PKW4 1024 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-202ENST00000346436 HARSP12081 509 aaKnown RBP12.14□□□□□ -0.47
CLCN6-202ENST00000346436 ATF7P17544 494 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-202ENST00000346436 HSPA1LP34931 641 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 PTPN12Q05209 780 aaKnown RBP12.14□□□□□ -0.47
CLCN6-202ENST00000346436 DPCR1Q3MIW9 517 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 CCDC65Q8IXS2 484 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 GABPB2Q8TAK5 448 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-202ENST00000346436 PDLIM2Q96JY6 352 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 ATP10DQ9P241 1426 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 ARHGEF40Q8TER5 1519 aa12.14□□□□□ -0.47
CLCN6-202ENST00000346436 STK25O00506 426 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 COBLO75128 1261 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 UBXN2AP68543 259 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 UBXN1Q04323 297 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 SPAG1Q07617 926 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 PPP2R5BQ15173 497 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
CLCN6-202ENST00000346436 CPS1P31327 1500 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 SEMA3EO15041 775 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 BRINP3Q76B58 766 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 DESI2Q9BSY9 194 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 CTAGE15A4D2H0 777 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 XPOTO43592 962 aaKnown RBP12.13□□□□□ -0.47
CLCN6-202ENST00000346436 IGKV5-2P06315 115 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 CTAGE8P0CG41 777 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 YARSP54577 528 aaKnown RBP12.13□□□□□ -0.47
CLCN6-202ENST00000346436 CFAP58Q5T655 872 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 CTAGE6Q86UF2 777 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 CTAGE4Q8IX94 777 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 EXOC8Q8IYI6 725 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 ARHGAP31Q2M1Z3 1444 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 H0YCG3 227 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 CFBP00751 764 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 PAFAH1B1P43034 410 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 BCAMP50895 628 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 APOBEC3FQ8IUX4 373 aaKnown RBP12.13□□□□□ -0.47
CLCN6-202ENST00000346436 IGSF22Q8N9C0 903 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 TGFBRAP1Q8WUH2 860 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 SERTAD1Q9UHV2 236 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 AK9Q5TCS8 1911 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 ALAS1P13196 640 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 ERCC3P19447 782 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 PPP2R3AQ06190 1150 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 ARHGEF25Q86VW2 580 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 ZNF274Q96GC6 653 aaPredicted RBP12.13□□□□□ -0.47
CLCN6-202ENST00000346436 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 FRMD4BQ9Y2L6 1034 aa12.13□□□□□ -0.47
CLCN6-202ENST00000346436 ANKARQ7Z5J8 1434 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 MAP3K15Q6ZN16 1313 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 ADCY7P51828 1080 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 EN1Q05925 392 aaPredicted RBP12.12□□□□□ -0.47
CLCN6-202ENST00000346436 SPATA5Q8NB90 893 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 CRB1P82279 1406 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 CTAGE9A4FU28 777 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 PPP1R2P41236 205 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
CLCN6-202ENST00000346436 DTHD1Q6ZMT9 781 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 PIK3AP1Q6ZUJ8 805 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 TMEM87BQ96K49 555 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 RPS6KC1Q96S38 1066 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 VPS54Q9P1Q0 977 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 IKBKGQ9Y6K9 419 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 TDRD7Q8NHU6 1098 aaKnown RBP12.12□□□□□ -0.47
CLCN6-202ENST00000346436 PGBD1Q96JS3 809 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms