RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 SLF2Q8IX21 1173 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 SMARCC2Q8TAQ2 1214 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 UBA5Q9GZZ9 404 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 CLIP2Q9UDT6 1046 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 NAP1L2Q9ULW6 460 aaPredicted RBP8.58□□□□□ -1.04
GDNF-202ENST00000344622 MYH7BA7E2Y1 1941 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 LOC285556D6RIA3 1793 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 NID2Q14112 1375 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 GOLGA8BA8MQT2 603 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 KIF28PB7ZC32 967 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 EDIL3O43854 480 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 PDHBP11177 359 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 GJB2P29033 226 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 KRT26Q7Z3Y9 468 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 ESR2Q92731 530 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 ZIC5Q96T25 663 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 FBXO28Q9NVF7 368 aa8.58□□□□□ -1.04
GDNF-202ENST00000344622 FAM205CA6NFA0 338 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 HTRA3P83110 453 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 MOGSQ13724 837 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 VGLL4Q14135 290 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 FKBP1CQ5VVH2 108 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 PNMA1Q8ND90 353 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.57□□□□□ -1.04
GDNF-202ENST00000344622 GZF1Q9H116 711 aaPredicted RBP8.57□□□□□ -1.04
GDNF-202ENST00000344622 ZNF112Q9UJU3 913 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 ZBTB21Q9ULJ3 1066 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 SNCAIPQ9Y6H5 919 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 DDX49Q9Y6V7 483 aaKnown RBP8.57□□□□□ -1.04
GDNF-202ENST00000344622 MPHOSPH10O00566 681 aaKnown RBP8.57□□□□□ -1.04
GDNF-202ENST00000344622 SNHG28P0DPA3 235 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 GUCY1B3Q02153 619 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 KRT32Q14532 448 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 RALYLQ86SE5 291 aaKnown RBP8.57□□□□□ -1.04
GDNF-202ENST00000344622 CDCA5Q96FF9 252 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 TCP11L1Q9NUJ3 509 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 ST18O60284 1047 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 PSMA5P28066 241 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 WTAPQ15007 396 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 NUP133Q8WUM0 1156 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 KRT23Q9C075 422 aa8.57□□□□□ -1.04
GDNF-202ENST00000344622 CNTNAP5Q8WYK1 1306 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 SYT1P21579 422 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 PDE4BQ07343 736 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 IFIT1BQ5T764 474 aaKnown RBP8.56□□□□□ -1.04
GDNF-202ENST00000344622 TMED8Q6PL24 325 aaPredicted RBP8.56□□□□□ -1.04
GDNF-202ENST00000344622 FANCBQ8NB91 859 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 ANKS1AQ92625 1134 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 TNPO1Q92973 898 aaKnown RBP8.56□□□□□ -1.04
GDNF-202ENST00000344622 NOL10Q9BSC4 688 aaKnown RBP8.56□□□□□ -1.04
GDNF-202ENST00000344622 DHX36Q9H2U1 1008 aaKnown RBP8.56□□□□□ -1.04
GDNF-202ENST00000344622 GDPD2Q9HCC8 539 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 COL6A3P12111 3177 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 PTPDC1A2A3K4 754 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 TBC1D12O60347 775 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 OXER1Q8TDS5 423 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 ZNF274Q96GC6 653 aaPredicted RBP8.56□□□□□ -1.04
GDNF-202ENST00000344622 WRNIP1Q96S55 665 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 WDR19Q8NEZ3 1342 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 OPLAHO14841 1288 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 DPY19L2Q6NUT2 758 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 TTC6Q86TZ1 520 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 CNNM2Q9H8M5 875 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 EMILIN3Q9NT22 766 aa8.56□□□□□ -1.04
GDNF-202ENST00000344622 DOCK5Q9H7D0 1870 aa8.55□□□□□ -1.04
GDNF-202ENST00000344622 PALM3A6NDB9 673 aaPredicted RBP8.55□□□□□ -1.04
GDNF-202ENST00000344622 PTPRAP18433 802 aa8.55□□□□□ -1.04
GDNF-202ENST00000344622 CAP1Q01518 475 aa8.55□□□□□ -1.04
GDNF-202ENST00000344622 ABCB5Q2M3G0 1257 aa8.55□□□□□ -1.04
GDNF-202ENST00000344622 TREML2Q5T2D2 321 aa8.55□□□□□ -1.04
GDNF-202ENST00000344622 ZNF444Q8N0Y2 327 aaPredicted RBP8.55□□□□□ -1.04
GDNF-202ENST00000344622 TMEM87BQ96K49 555 aa8.55□□□□□ -1.04
GDNF-202ENST00000344622 IRF6O14896 467 aa8.55□□□□□ -1.04
GDNF-202ENST00000344622 USP50Q70EL3 339 aaPredicted RBP8.55□□□□□ -1.04
GDNF-202ENST00000344622 CRACR2BQ8N4Y2 399 aaPredicted RBP8.55□□□□□ -1.04
GDNF-202ENST00000344622 GPKOWQ92917 476 aaPredicted RBP eCLIP8.55□□□□□ -1.04
GDNF-202ENST00000344622 A0A0G2JMZ2 1700 aa8.55□□□□□ -1.04
GDNF-202ENST00000344622 IGSF3O75054 1194 aa8.55□□□□□ -1.04
GDNF-202ENST00000344622 HMGB1P09429 215 aaKnown RBP8.55□□□□□ -1.04
GDNF-202ENST00000344622 MKRN3Q13064 507 aaKnown RBP8.55□□□□□ -1.04
GDNF-202ENST00000344622 FERMT3Q86UX7 667 aa8.55□□□□□ -1.04
GDNF-202ENST00000344622 FOXP4Q8IVH2 680 aaPredicted RBP8.55□□□□□ -1.04
GDNF-202ENST00000344622 KCNJ14Q9UNX9 436 aa8.55□□□□□ -1.04
GDNF-202ENST00000344622 MTMR6Q9Y217 621 aa8.55□□□□□ -1.04
GDNF-202ENST00000344622 F5H6K3 240 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 NDUFB10O96000 172 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 KCNA4P22459 653 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 METAP2P50579 478 aaKnown RBP eCLIP8.54□□□□□ -1.04
GDNF-202ENST00000344622 ATP2B2Q01814 1243 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 KLRC3Q07444 240 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 TRDNQ13061 729 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 MTMR2Q13614 643 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 DGKHQ86XP1 1220 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 MKL1Q969V6 931 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 UBAC1Q9BSL1 405 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 SLC12A7Q9Y666 1083 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 PITPNM2Q9BZ72 1349 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 ZBTB43O43298 467 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 MYO1BO43795 1136 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 RNF41Q9H4P4 317 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms