RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 CCDC82Q8N4S0 544 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 CUL5Q93034 780 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 TCP11L1Q9NUJ3 509 aa9.46□□□□□ -0.89
HMGCR-202ENST00000343975 MKRN1Q9UHC7 482 aaKnown RBP9.46□□□□□ -0.89
HMGCR-202ENST00000343975 ROBO3Q96MS0 1386 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 F5H6K3 240 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 KIF3CO14782 793 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 USP2O75604 605 aaPredicted RBP9.46□□□□□ -0.9
HMGCR-202ENST00000343975 APLP1P51693 650 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 HMGCS2P54868 508 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 GABPAQ06546 454 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 KLRC3Q07444 240 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 MTMR2Q13614 643 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 ADCK5Q3MIX3 580 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 TATDN1Q6P1N9 297 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 SH3BP5LQ7L8J4 393 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 SPICE1Q8N0Z3 855 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 PIBF1Q8WXW3 757 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 TMEM47Q9BQJ4 181 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 VCPKMTQ9H867 229 aa9.46□□□□□ -0.9
HMGCR-202ENST00000343975 USP17L15C9J2P7 530 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 USP17L13C9JLJ4 530 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 TMEM232C9JQI7 657 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 USP17L11C9JVI0 530 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 USP17L18D6R9N7 530 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 USP17L22D6RA61 530 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 USP17L17D6RBQ6 530 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 USP17L19D6RCP7 530 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 USP17L20D6RJB6 530 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 SH2B2O14492 632 aaPredicted RBP9.45□□□□□ -0.9
HMGCR-202ENST00000343975 WDR46O15213 610 aaKnown RBP9.45□□□□□ -0.9
HMGCR-202ENST00000343975 FDX1P10109 184 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 USP17L24Q0WX57 530 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 KIF22Q14807 665 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 RCSD1Q6JBY9 416 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 RAB11FIP4Q86YS3 637 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.45□□□□□ -0.91e-27■■□□□ 12.2
HMGCR-202ENST00000343975 MPHOSPH6Q99547 160 aaKnown RBP9.45□□□□□ -0.9
HMGCR-202ENST00000343975 INCENPQ9NQS7 918 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 IVNS1ABPQ9Y6Y0 642 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 MAST2Q6P0Q8 1798 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 STAT2P52630 851 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 BACE1P56817 501 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 REM2Q8IYK8 340 aaPredicted RBP9.45□□□□□ -0.9
HMGCR-202ENST00000343975 GTF3C2Q8WUA4 911 aaPredicted RBP9.45□□□□□ -0.9
HMGCR-202ENST00000343975 KIFC2Q96AC6 838 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 ZNF274Q96GC6 653 aaPredicted RBP9.45□□□□□ -0.9
HMGCR-202ENST00000343975 TEPSINQ96N21 525 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 HOXC10Q9NYD6 342 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 SYNPO2Q9UMS6 1093 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 TIAM2Q8IVF5 1701 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 POTECB2RU33 542 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 PDIA4P13667 645 aaKnown RBP9.45□□□□□ -0.9
HMGCR-202ENST00000343975 PTPRAP18433 802 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 CCDC83Q8IWF9 413 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 ENAHQ8N8S7 591 aaPredicted RBP9.45□□□□□ -0.9
HMGCR-202ENST00000343975 CCDC148Q8NFR7 591 aa9.45□□□□□ -0.9
HMGCR-202ENST00000343975 KLRF2D3W0D1 207 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 ZBTB48P10074 688 aaPredicted RBP9.44□□□□□ -0.9
HMGCR-202ENST00000343975 RCAN1P53805 252 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 NOL9Q5SY16 702 aaKnown RBP9.44□□□□□ -0.9
HMGCR-202ENST00000343975 FANCBQ8NB91 859 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 PARK7Q99497 189 aaKnown RBP9.44□□□□□ -0.9
HMGCR-202ENST00000343975 WDR18Q9BV38 432 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 SLC26A6Q9BXS9 759 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 KIAA1683Q9H0B3 1180 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 EHMT1Q9H9B1 1298 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 B4DLN1 442 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 MARCH6O60337 910 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 MRPL12P52815 198 aaKnown RBP9.44□□□□□ -0.9
HMGCR-202ENST00000343975 APOA5Q6Q788 366 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 MOB2Q70IA6 237 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 CYB5R4Q7L1T6 521 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 SPRYD3Q8NCJ5 442 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 PAGR1Q9BTK6 254 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 FEM1BQ9UK73 627 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 TMX2Q9Y320 296 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 DICER1Q9UPY3 1922 aaKnown RBP9.44□□□□□ -0.9
HMGCR-202ENST00000343975 RXRAP19793 462 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 TAF1CQ15572 869 aaPredicted RBP9.44□□□□□ -0.9
HMGCR-202ENST00000343975 MCTP1Q6DN14 999 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 STOX1Q6ZVD7 989 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 FOXD4L1Q9NU39 408 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 ORC3Q9UBD5 711 aaPredicted RBP9.44□□□□□ -0.9
HMGCR-202ENST00000343975 SCN4AP35499 1836 aa9.44□□□□□ -0.9
HMGCR-202ENST00000343975 CCDC84Q86UT8 332 aaPredicted RBP9.43□□□□□ -0.9
HMGCR-202ENST00000343975 CDAN1Q8IWY9 1227 aa9.43□□□□□ -0.9
HMGCR-202ENST00000343975 WNK4Q96J92 1243 aa9.43□□□□□ -0.9
HMGCR-202ENST00000343975 LARP6Q9BRS8 491 aaKnown RBP9.43□□□□□ -0.9
HMGCR-202ENST00000343975 GLT8D2Q9H1C3 349 aa9.43□□□□□ -0.9
HMGCR-202ENST00000343975 FRMPD2Q68DX3 1309 aaPredicted RBP9.43□□□□□ -0.9
HMGCR-202ENST00000343975 A0A1B0GUL6 1792 aa9.43□□□□□ -0.9
HMGCR-202ENST00000343975 NMT2O60551 498 aa9.43□□□□□ -0.9
HMGCR-202ENST00000343975 NDUFB10O96000 172 aa9.43□□□□□ -0.9
HMGCR-202ENST00000343975 SGMS1Q86VZ5 419 aa9.43□□□□□ -0.9
HMGCR-202ENST00000343975 CPXCR1Q8N123 301 aa9.43□□□□□ -0.9
HMGCR-202ENST00000343975 PRPF38AQ8NAV1 312 aaKnown RBP9.43□□□□□ -0.9
HMGCR-202ENST00000343975 KCNB2Q92953 911 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms