RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 SKAP1Q86WV1 359 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 CEP95Q96GE4 821 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 NBPF3Q9H094 633 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 MORF4L1Q9UBU8 362 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 CPA4Q9UI42 421 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 MYPNQ86TC9 1320 aa15.48■□□□□ 0.07
HLA-DQA1-201ENST00000343139 HERVK_113P62684 666 aa15.48■□□□□ 0.07
HLA-DQA1-201ENST00000343139 ZYXQ15942 572 aaKnown RBP15.48■□□□□ 0.07
HLA-DQA1-201ENST00000343139 CASC1Q6TDU7 716 aa15.48■□□□□ 0.07
HLA-DQA1-201ENST00000343139 CLEC10AQ8IUN9 316 aa15.48■□□□□ 0.07
HLA-DQA1-201ENST00000343139 TNS4Q8IZW8 715 aa15.48■□□□□ 0.07
HLA-DQA1-201ENST00000343139 MAP4K1Q92918 833 aa15.48■□□□□ 0.07
HLA-DQA1-201ENST00000343139 P2RX7Q99572 595 aaKnown RBP15.48■□□□□ 0.07
HLA-DQA1-201ENST00000343139 ESYT1Q9BSJ8 1104 aa15.48■□□□□ 0.07
HLA-DQA1-201ENST00000343139 TACC3Q9Y6A5 838 aa15.48■□□□□ 0.07
HLA-DQA1-201ENST00000343139 U3KPZ7 1027 aaPredicted RBP15.48■□□□□ 0.07
HLA-DQA1-201ENST00000343139 CDC45O75419 566 aa15.47■□□□□ 0.07
HLA-DQA1-201ENST00000343139 HAND2P61296 217 aa15.47■□□□□ 0.07
HLA-DQA1-201ENST00000343139 FAM47AQ5JRC9 791 aa15.47■□□□□ 0.07
HLA-DQA1-201ENST00000343139 TBC1D10CQ8IV04 446 aa15.47■□□□□ 0.07
HLA-DQA1-201ENST00000343139 GMCL1P1Q8NEA9 526 aa15.47■□□□□ 0.07
HLA-DQA1-201ENST00000343139 CD99L2Q8TCZ2 262 aa15.47■□□□□ 0.07
HLA-DQA1-201ENST00000343139 RPAP3Q9H6T3 665 aaPredicted RBP15.47■□□□□ 0.07
HLA-DQA1-201ENST00000343139 HOXC10Q9NYD6 342 aa15.47■□□□□ 0.07
HLA-DQA1-201ENST00000343139 RANBP6O60518 1105 aaKnown RBP15.46■□□□□ 0.07
HLA-DQA1-201ENST00000343139 PRMT2P55345 433 aa15.46■□□□□ 0.07
HLA-DQA1-201ENST00000343139 COG2Q14746 738 aa15.46■□□□□ 0.07
HLA-DQA1-201ENST00000343139 KIAA1211Q6ZU35 1233 aa15.46■□□□□ 0.07
HLA-DQA1-201ENST00000343139 OTOP1Q7RTM1 612 aa15.46■□□□□ 0.07
HLA-DQA1-201ENST00000343139 ESR2Q92731 530 aa15.46■□□□□ 0.07
HLA-DQA1-201ENST00000343139 TTC14Q96N46 770 aa15.46■□□□□ 0.07
HLA-DQA1-201ENST00000343139 CNNM2Q9H8M5 875 aa15.46■□□□□ 0.07
HLA-DQA1-201ENST00000343139 EFCC1Q9HA90 598 aa15.46■□□□□ 0.07
HLA-DQA1-201ENST00000343139 IL17RBQ9NRM6 502 aa15.46■□□□□ 0.07
HLA-DQA1-201ENST00000343139 CLIP2Q9UDT6 1046 aa15.46■□□□□ 0.07
HLA-DQA1-201ENST00000343139 ATP2B2Q01814 1243 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 PTH1RQ03431 593 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 CCDC178Q5BJE1 867 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 KIAA1755Q5JYT7 1200 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 MCOLN1Q9GZU1 580 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 INCENPQ9NQS7 918 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 RABGAP1Q9Y3P9 1069 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 MYH8P13535 1937 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 F5H6K3 240 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 KLRC3Q07444 240 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 FBXO46Q6PJ61 603 aaPredicted RBP15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 ANKRD13CQ8N6S4 541 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 MB21D1Q8N884 522 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 KRT23Q9C075 422 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 LSG1Q9H089 658 aaKnown RBP15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 TOMM22Q9NS69 142 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 RBPJLQ9UBG7 517 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 TRIM17Q9Y577 477 aa15.45■□□□□ 0.06
HLA-DQA1-201ENST00000343139 CASP8AP2Q9UKL3 1982 aa15.44■□□□□ 0.06
HLA-DQA1-201ENST00000343139 SPDYE16A6NNV3 312 aaPredicted RBP15.44■□□□□ 0.06
HLA-DQA1-201ENST00000343139 HOXD10P28358 340 aa15.44■□□□□ 0.06
HLA-DQA1-201ENST00000343139 PSMC4P43686 418 aa15.44■□□□□ 0.06
HLA-DQA1-201ENST00000343139 FCGRTP55899 365 aa15.44■□□□□ 0.06
HLA-DQA1-201ENST00000343139 GPRC5AQ8NFJ5 357 aa15.44■□□□□ 0.06
HLA-DQA1-201ENST00000343139 GMCL1Q96IK5 515 aa15.44■□□□□ 0.06
HLA-DQA1-201ENST00000343139 TANGO6Q9C0B7 1094 aa15.44■□□□□ 0.06
HLA-DQA1-201ENST00000343139 NEDD4P46934 1319 aa15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 NDUFB10O96000 172 aa15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 CYP21A2P08686 494 aa15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 DSG3P32926 999 aa15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 CAP1Q01518 475 aa15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 RRP12Q5JTH9 1297 aaKnown RBP15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 POTEEQ6S8J3 1075 aa15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 DGKHQ86XP1 1220 aa15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 SPICE1Q8N0Z3 855 aa15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 TRIM47Q96LD4 638 aa15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 ADAMTS5Q9UNA0 930 aa15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 STX8Q9UNK0 236 aa15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 PTPN22Q9Y2R2 807 aa15.43■□□□□ 0.06
HLA-DQA1-201ENST00000343139 TOP1P11387 765 aaKnown RBP15.42■□□□□ 0.06
HLA-DQA1-201ENST00000343139 ERVK-9P63128 1117 aa15.42■□□□□ 0.06
HLA-DQA1-201ENST00000343139 ERVK-24P63145 666 aa15.42■□□□□ 0.06
HLA-DQA1-201ENST00000343139 IQCA1Q86XH1 822 aa15.42■□□□□ 0.06
HLA-DQA1-201ENST00000343139 ANKS1AQ92625 1134 aa15.42■□□□□ 0.06
HLA-DQA1-201ENST00000343139 TXNRD2Q9NNW7 524 aa15.42■□□□□ 0.06
HLA-DQA1-201ENST00000343139 SRRDQ9UH36 339 aa15.42■□□□□ 0.06
HLA-DQA1-201ENST00000343139 NMT2O60551 498 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 PLA2G6O60733 806 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 FLOT1O75955 427 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 FMNL1O95466 1100 aaPredicted RBP15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 CTGFP29279 349 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 CCNA1P78396 465 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 TRDNQ13061 729 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 ARHGAP39Q9C0H5 1083 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 RBM8AQ9Y5S9 174 aaKnown RBP15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 LAMA4Q16363 1823 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 EPB41L2O43491 1005 aaKnown RBP15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 KDM4AO75164 1064 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 CNMDO75829 334 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 MAPK4P31152 587 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 NECTIN1Q15223 517 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 FAM83BQ5T0W9 1011 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 SLFN13Q68D06 897 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 RCSD1Q6JBY9 416 aa15.41■□□□□ 0.06
HLA-DQA1-201ENST00000343139 LRRC47Q8N1G4 583 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms