RNA–Protein interactions for RNA: ENST00000343131.6

SYCE1-202, Transcript of synaptonemal complex central element protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYCE1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-202ENST00000343131 PCDH10Q9P2E7 1040 aa19.1■□□□□ 0.65
SYCE1-202ENST00000343131 SWAP70Q9UH65 585 aa19.1■□□□□ 0.65
SYCE1-202ENST00000343131 NR2E3Q9Y5X4 410 aa19.1■□□□□ 0.65
SYCE1-202ENST00000343131 DNAH12Q6ZR08 3092 aa19.1■□□□□ 0.65
SYCE1-202ENST00000343131 CCNA1P78396 465 aa19.09■□□□□ 0.65
SYCE1-202ENST00000343131 ICA1Q05084 483 aa19.09■□□□□ 0.65
SYCE1-202ENST00000343131 MAP2K5Q13163 448 aa19.09■□□□□ 0.65
SYCE1-202ENST00000343131 UBE3CQ15386 1083 aa19.09■□□□□ 0.65
SYCE1-202ENST00000343131 LBX2Q6XYB7 198 aa19.09■□□□□ 0.65
SYCE1-202ENST00000343131 SPICE1Q8N0Z3 855 aa19.09■□□□□ 0.65
SYCE1-202ENST00000343131 ANKLE1Q8NAG6 615 aa19.09■□□□□ 0.65
SYCE1-202ENST00000343131 ATP8A2Q9NTI2 1148 aa19.09■□□□□ 0.65
SYCE1-202ENST00000343131 FLRT1Q9NZU1 646 aa19.09■□□□□ 0.65
SYCE1-202ENST00000343131 SLC4A4Q9Y6R1 1079 aa19.09■□□□□ 0.65
SYCE1-202ENST00000343131 ZNFX1Q9P2E3 1918 aaKnown RBP19.08■□□□□ 0.65
SYCE1-202ENST00000343131 USP17L12C9JPN9 530 aa19.08■□□□□ 0.64
SYCE1-202ENST00000343131 USP17L21D6R901 530 aa19.08■□□□□ 0.64
SYCE1-202ENST00000343131 C12orf60Q5U649 245 aa19.08■□□□□ 0.64
SYCE1-202ENST00000343131 C7orf61Q8IZ16 206 aa19.08■□□□□ 0.64
SYCE1-202ENST00000343131 ECHDC1Q9NTX5 307 aa19.08■□□□□ 0.64
SYCE1-202ENST00000343131 CDK8P49336 464 aa19.07■□□□□ 0.64
SYCE1-202ENST00000343131 SAMD1Q6SPF0 538 aaPredicted RBP19.07■□□□□ 0.64
SYCE1-202ENST00000343131 C16orf86Q6ZW13 317 aa19.07■□□□□ 0.64
SYCE1-202ENST00000343131 SIAH1Q8IUQ4 282 aa19.07■□□□□ 0.64
SYCE1-202ENST00000343131 TRMT44Q8IYL2 757 aaKnown RBP19.07■□□□□ 0.64
SYCE1-202ENST00000343131 PRO3102Q9H379 93 aa19.07■□□□□ 0.64
SYCE1-202ENST00000343131 OGDHLQ9ULD0 1010 aa19.07■□□□□ 0.64
SYCE1-202ENST00000343131 PFASO15067 1338 aa19.06■□□□□ 0.64
SYCE1-202ENST00000343131 PTPREP23469 700 aa19.06■□□□□ 0.64
SYCE1-202ENST00000343131 GRB14Q14449 540 aa19.06■□□□□ 0.64
SYCE1-202ENST00000343131 AMOTL1Q8IY63 956 aa19.06■□□□□ 0.64
SYCE1-202ENST00000343131 DDRGK1Q96HY6 314 aa19.06■□□□□ 0.64
SYCE1-202ENST00000343131 MOV10L1Q9BXT6 1211 aaKnown RBP19.06■□□□□ 0.64
SYCE1-202ENST00000343131 NBPF3Q9H094 633 aa19.06■□□□□ 0.64
SYCE1-202ENST00000343131 C11orf49Q9H6J7 331 aa19.06■□□□□ 0.64
SYCE1-202ENST00000343131 ARHGEF10LQ9HCE6 1279 aa19.06■□□□□ 0.64
SYCE1-202ENST00000343131 IVNS1ABPQ9Y6Y0 642 aa19.06■□□□□ 0.64
SYCE1-202ENST00000343131 SLC15A5A6NIM6 579 aa19.05■□□□□ 0.64
SYCE1-202ENST00000343131 GLRX3O76003 335 aaKnown RBP19.05■□□□□ 0.64
SYCE1-202ENST00000343131 CAPN2P17655 700 aa19.05■□□□□ 0.64
SYCE1-202ENST00000343131 ATP2B2Q01814 1243 aa19.05■□□□□ 0.64
SYCE1-202ENST00000343131 ZSCAN25Q6NSZ9 544 aa19.05■□□□□ 0.64
SYCE1-202ENST00000343131 CTR9Q6PD62 1173 aa19.05■□□□□ 0.64
SYCE1-202ENST00000343131 NPLOC4Q8TAT6 608 aa19.05■□□□□ 0.64
SYCE1-202ENST00000343131 GPATCH3Q96I76 525 aa19.05■□□□□ 0.64
SYCE1-202ENST00000343131 ZMYND8Q9ULU4 1186 aaPredicted RBP19.05■□□□□ 0.64
SYCE1-202ENST00000343131 FLOT1O75955 427 aa19.04■□□□□ 0.64
SYCE1-202ENST00000343131 COG2Q14746 738 aa19.04■□□□□ 0.64
SYCE1-202ENST00000343131 STK11IPQ8N1F8 1099 aa19.04■□□□□ 0.64
SYCE1-202ENST00000343131 KBTBD3Q8NAB2 608 aa19.04■□□□□ 0.64
SYCE1-202ENST00000343131 LPAR1Q92633 364 aa19.04■□□□□ 0.64
SYCE1-202ENST00000343131 ATG4CQ96DT6 458 aa19.04■□□□□ 0.64
SYCE1-202ENST00000343131 SPATC1LQ9H0A9 340 aa19.04■□□□□ 0.64
SYCE1-202ENST00000343131 DCTPP1Q9H773 170 aa19.04■□□□□ 0.64
SYCE1-202ENST00000343131 SH2D4AQ9H788 454 aa19.04■□□□□ 0.64
SYCE1-202ENST00000343131 VCPKMTQ9H867 229 aa19.04■□□□□ 0.64
SYCE1-202ENST00000343131 ARPP21Q9UBL0 812 aaPredicted RBP19.04■□□□□ 0.64
SYCE1-202ENST00000343131 TMX2Q9Y320 296 aa19.04■□□□□ 0.64
SYCE1-202ENST00000343131 EEF2P13639 858 aaKnown RBP19.03■□□□□ 0.64
SYCE1-202ENST00000343131 CYP2C19P33261 490 aa19.03■□□□□ 0.64
SYCE1-202ENST00000343131 PLS1Q14651 629 aa19.03■□□□□ 0.64
SYCE1-202ENST00000343131 LHX8Q68G74 356 aa19.03■□□□□ 0.64
SYCE1-202ENST00000343131 OTUD7AQ8TE49 926 aaPredicted RBP19.03■□□□□ 0.64
SYCE1-202ENST00000343131 EPB41L4AQ9HCS5 686 aaPredicted RBP19.03■□□□□ 0.64
SYCE1-202ENST00000343131 ROBO3Q96MS0 1386 aa19.03■□□□□ 0.64
SYCE1-202ENST00000343131 M0R2C6 588 aa19.02■□□□□ 0.64
SYCE1-202ENST00000343131 SYN1P17600 705 aa19.02■□□□□ 0.64
SYCE1-202ENST00000343131 ERCC3P19447 782 aa19.02■□□□□ 0.64
SYCE1-202ENST00000343131 ADORA2AP29274 412 aa19.02■□□□□ 0.64
SYCE1-202ENST00000343131 MFSD14CQ5VZR4 134 aa19.02■□□□□ 0.64
SYCE1-202ENST00000343131 OSBP2Q969R2 916 aa19.02■□□□□ 0.64
SYCE1-202ENST00000343131 CCDC17Q96LX7 622 aa19.02■□□□□ 0.64
SYCE1-202ENST00000343131 STRBPQ96SI9 672 aaKnown RBP19.02■□□□□ 0.64
SYCE1-202ENST00000343131 FBXO28Q9NVF7 368 aa19.02■□□□□ 0.64
SYCE1-202ENST00000343131 STAP2Q9UGK3 403 aa19.02■□□□□ 0.64
SYCE1-202ENST00000343131 PCDHB15Q9Y5E8 787 aa19.02■□□□□ 0.64
SYCE1-202ENST00000343131 LTBP2Q14767 1821 aa19.02■□□□□ 0.63
SYCE1-202ENST00000343131 GSG1L2A8MUP6 293 aa19.01■□□□□ 0.63
SYCE1-202ENST00000343131 WDR46O15213 610 aaKnown RBP19.01■□□□□ 0.63
SYCE1-202ENST00000343131 RAD21O60216 631 aa19.01■□□□□ 0.63
SYCE1-202ENST00000343131 HOXC6P09630 235 aa19.01■□□□□ 0.63
SYCE1-202ENST00000343131 DSG3P32926 999 aa19.01■□□□□ 0.63
SYCE1-202ENST00000343131 TRPV1Q8NER1 839 aa19.01■□□□□ 0.63
SYCE1-202ENST00000343131 APPBP2Q92624 585 aa19.01■□□□□ 0.63
SYCE1-202ENST00000343131 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.01■□□□□ 0.63
SYCE1-202ENST00000343131 HOXC10Q9NYD6 342 aa19.01■□□□□ 0.63
SYCE1-202ENST00000343131 GPAA1O43292 621 aa19■□□□□ 0.63
SYCE1-202ENST00000343131 COL6A1P12109 1028 aa19■□□□□ 0.63
SYCE1-202ENST00000343131 NCAPG2Q86XI2 1143 aa19■□□□□ 0.63
SYCE1-202ENST00000343131 MB21D1Q8N884 522 aa19■□□□□ 0.63
SYCE1-202ENST00000343131 MINDY4BA8MYZ0 360 aa18.99■□□□□ 0.63
SYCE1-202ENST00000343131 RNF113AO15541 343 aaKnown RBP18.99■□□□□ 0.63
SYCE1-202ENST00000343131 CYBAP13498 195 aa18.99■□□□□ 0.63
SYCE1-202ENST00000343131 RASA1P20936 1047 aa18.99■□□□□ 0.63
SYCE1-202ENST00000343131 CNGA1P29973 690 aa18.99■□□□□ 0.63
SYCE1-202ENST00000343131 FAM83BQ5T0W9 1011 aa18.99■□□□□ 0.63
SYCE1-202ENST00000343131 DPP9Q86TI2 863 aa18.99■□□□□ 0.63
SYCE1-202ENST00000343131 SHCBP1Q8NEM2 672 aa18.99■□□□□ 0.63
SYCE1-202ENST00000343131 NUP88Q99567 741 aaPredicted RBP18.99■□□□□ 0.63
SYCE1-202ENST00000343131 KANSL2Q9H9L4 492 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms