RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 APTXQ7Z2E3 356 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 GPKOWQ92917 476 aaPredicted RBP eCLIP11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 MTA3Q9BTC8 594 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 BRIP1Q9BX63 1249 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 RBM28Q9NW13 759 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 BSDC1Q9NW68 430 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 ARGLU1Q9NWB6 273 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 PUF60Q9UHX1 559 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 ZNF652Q9Y2D9 606 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 ZNF804BA4D1E1 1349 aa11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 PES1O00541 588 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 N4BP3O15049 544 aa11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 KIF20AO95235 890 aa11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 CCDC175P0C221 793 aa11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 RCAN1P53805 252 aa11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 UBE4AQ14139 1066 aa11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 FILIP1LQ4L180 1135 aa11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 SLC51AQ86UW1 340 aa11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 RASSF8Q8NHQ8 419 aa11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 FERMT2Q96AC1 680 aa11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 NSUN4Q96CB9 384 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 EEF2KMTQ96G04 330 aa11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 SRRTQ9BXP5 876 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 DCP1AQ9NPI6 582 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 FAM53CQ9NYF3 392 aa11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 ADD3Q9UEY8 706 aaKnown RBP11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 COL1A1P02452 1464 aaPredicted RBP11.22□□□□□ -0.61
UBE2D3-203ENST00000343106 ABL1P00519 1130 aa11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 TFRCP02786 760 aaKnown RBP11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 USP17L8P0C7I0 530 aa11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 PLA2G4AP47712 749 aa11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 FXR1P51114 621 aaKnown RBP eCLIP11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 PPP2R5BQ15173 497 aa11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 SH3RF1Q7Z6J0 888 aa11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 KIFC2Q96AC6 838 aa11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 GSDMAQ96QA5 445 aa11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 MTRQ99707 1265 aa11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 MCM9Q9NXL9 1143 aa11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 TAB2Q9NYJ8 693 aa11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 MRFAP1Q9Y605 127 aa11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 XDHP47989 1333 aa11.21□□□□□ -0.61
UBE2D3-203ENST00000343106 GOLGA6L9A6NEM1 432 aa11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 CALM1P0DP23 149 aa11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 CALM2P0DP24 149 aa11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 CALM3P0DP25 149 aa11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 SCG2P13521 617 aa11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 TBC1D9BQ66K14 1250 aa11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 IQUBQ8NA54 791 aa11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 ACRBPQ8NEB7 543 aa11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 TNFRSF25Q93038 417 aa11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 DYNLL2Q96FJ2 89 aa11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 NOL10Q9BSC4 688 aaKnown RBP11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 ZCCHC17Q9NP64 241 aaKnown RBP11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 ADGRG1Q9Y653 693 aa11.21□□□□□ -0.62
UBE2D3-203ENST00000343106 CNTNAP5Q8WYK1 1306 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 PP2D1A8MPX8 630 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 RNF225M0QZC1 329 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 GYPCP04921 128 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 HIBADHP31937 336 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 ATP2C1P98194 919 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 KRT31Q15323 416 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 ZNF569Q5MCW4 686 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 TXNRD3Q86VQ6 643 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 STAG2Q8N3U4 1231 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 PANX2Q96RD6 677 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 NUP88Q99567 741 aaPredicted RBP11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 PARD6BQ9BYG5 372 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 CRNKL1Q9BZJ0 848 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 GDAQ9Y2T3 454 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 MFAP3LO75121 409 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 DDAH1O94760 285 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 RPS8P62241 208 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 TFAP4Q01664 338 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 CDKAL1Q5VV42 579 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 LINC00116Q8NCU8 138 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 SRP68Q9UHB9 627 aaKnown RBP11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 COL4A1P02462 1669 aa11.2□□□□□ -0.62
UBE2D3-203ENST00000343106 KIF5CO60282 957 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 SASH3O75995 380 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 FBXO33Q7Z6M2 555 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 NELFBQ8WX92 580 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 CTAGE1Q96RT6 745 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 FAM205AQ6ZU69 1335 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 TRIM49BA6NDI0 452 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 ZRANB2O95218 330 aaKnown RBP eCLIP11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 BMP15O95972 392 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 SF3B3Q15393 1217 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 E2F4Q16254 413 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 KIF4BQ2VIQ3 1234 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 PDXDC2PQ6P474 469 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 PTF1AQ7RTS3 328 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 KAT14Q9H8E8 782 aa11.19□□□□□ -0.62
UBE2D3-203ENST00000343106 SPATA31A1Q5TZJ5 1347 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 RPN1P04843 607 aaKnown RBP11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 TPM1P09493 284 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 PBX1P40424 430 aa11.18□□□□□ -0.62
UBE2D3-203ENST00000343106 STAT6P42226 847 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms