RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 EPB41P11171 864 aaKnown RBP8.97□□□□□ -0.97
UBE4B-202ENST00000343090 RPL13P26373 211 aaKnown RBP8.97□□□□□ -0.97
UBE4B-202ENST00000343090 PRPHP41219 470 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 ADCY7P51828 1080 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 CALCRLQ16602 461 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 CPLX4Q7Z7G2 160 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 ASAP1Q9ULH1 1129 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 A0A087WUV0 522 aaPredicted RBP8.97□□□□□ -0.97
UBE4B-202ENST00000343090 ARHGAP25P42331 645 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 MAGEA1P43355 309 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 PPP1R7Q15435 360 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 ASIC2Q16515 512 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 USP37Q86T82 979 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 KLHL7Q8IXQ5 586 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 FAM204AQ9H8W3 233 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBE4B-202ENST00000343090 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.97□□□□□ -0.97
UBE4B-202ENST00000343090 PPP2R2CQ9Y2T4 447 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 ATP6V0A2Q9Y487 856 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 NEO1Q92859 1461 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 TRPM1Q7Z4N2 1603 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 FRMD3A2A2Y4 597 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 GCKP35557 465 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 CCT5P48643 541 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 SF3A3Q12874 501 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBE4B-202ENST00000343090 TRAF1Q13077 416 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 FAM71BQ8TC56 605 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 SERPINA10Q9UK55 444 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 PARP3Q9Y6F1 533 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 CARMIL3Q8ND23 1372 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 EIF3CLB5ME19 914 aaKnown RBP8.97□□□□□ -0.97
UBE4B-202ENST00000343090 KCNJ18B7U540 433 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 HARSP12081 509 aaKnown RBP8.97□□□□□ -0.97
UBE4B-202ENST00000343090 KCNJ12Q14500 433 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 PTPROQ16827 1216 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 INF2Q27J81 1249 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 MMS22LQ6ZRQ5 1243 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 WDR66Q8TBY9 1149 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 EIF3CQ99613 913 aaKnown RBP8.97□□□□□ -0.97
UBE4B-202ENST00000343090 KCNK9Q9NPC2 374 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 FRMD4BQ9Y2L6 1034 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 PTCH1Q13635 1447 aa8.97□□□□□ -0.97
UBE4B-202ENST00000343090 USP27XA6NNY8 438 aa8.96□□□□□ -0.97
UBE4B-202ENST00000343090 TOM1O60784 492 aa8.96□□□□□ -0.97
UBE4B-202ENST00000343090 PCCAP05165 728 aaPredicted RBP8.96□□□□□ -0.97
UBE4B-202ENST00000343090 DDIT3P35638 169 aa8.96□□□□□ -0.97
UBE4B-202ENST00000343090 RRAGAQ7L523 313 aa8.96□□□□□ -0.97
UBE4B-202ENST00000343090 KRT25Q7Z3Z0 450 aa8.96□□□□□ -0.97
UBE4B-202ENST00000343090 GRAMD1CQ8IYS0 662 aa8.96□□□□□ -0.97
UBE4B-202ENST00000343090 GPHNQ9NQX3 736 aaPredicted RBP8.96□□□□□ -0.97
UBE4B-202ENST00000343090 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.96□□□□□ -0.97
UBE4B-202ENST00000343090 SMCO2A6NFE2 343 aa8.96□□□□□ -0.97
UBE4B-202ENST00000343090 KRT5P13647 590 aa8.96□□□□□ -0.97
UBE4B-202ENST00000343090 NCAPGQ9BPX3 1015 aa8.96□□□□□ -0.97
UBE4B-202ENST00000343090 ADAM21Q9UKJ8 722 aa8.96□□□□□ -0.97
UBE4B-202ENST00000343090 EFCAB6Q5THR3 1501 aa8.96□□□□□ -0.97
UBE4B-202ENST00000343090 FRMPD2Q68DX3 1309 aaPredicted RBP8.96□□□□□ -0.97
UBE4B-202ENST00000343090 GOLGA6BA6NDN3 693 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 TECP42680 631 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 MORC3Q14149 939 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 ARHGEF25Q86VW2 580 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 C2CD5Q86YS7 1000 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 SMYD4Q8IYR2 804 aaPredicted RBP8.96□□□□□ -0.98
UBE4B-202ENST00000343090 PPP1R14CQ8TAE6 165 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 SYMPKQ92797 1274 aaKnown RBP8.96□□□□□ -0.98
UBE4B-202ENST00000343090 NOX5Q96PH1 765 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 JPH2Q9BR39 696 aaPredicted RBP8.96□□□□□ -0.98
UBE4B-202ENST00000343090 PCDHA5Q9Y5H7 936 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 BACH1O14867 736 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 CETN3O15182 167 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 TNFAIP3P21580 790 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 CHRNDQ07001 517 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 RABGGTAQ92696 567 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 OSBP2Q969R2 916 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 AIFM3Q96NN9 605 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 PUS7LQ9H0K6 701 aaKnown RBP8.96□□□□□ -0.98
UBE4B-202ENST00000343090 RTEL1Q9NZ71 1219 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 SLAIN2Q9P270 581 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 PRKAB2O43741 272 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 BUB1BO60566 1050 aaPredicted RBP8.96□□□□□ -0.98
UBE4B-202ENST00000343090 CYP2E1P05181 493 aaPredicted RBP8.96□□□□□ -0.98
UBE4B-202ENST00000343090 SLC1A4P43007 532 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 RPS8P62241 208 aaKnown RBP8.96□□□□□ -0.98
UBE4B-202ENST00000343090 GNGT1P63211 74 aa8.96□□□□□ -0.98
UBE4B-202ENST00000343090 PTPN12Q05209 780 aaKnown RBP8.96□□□□□ -0.98
UBE4B-202ENST00000343090 FNBP4Q8N3X1 1017 aaPredicted RBP8.96□□□□□ -0.98
UBE4B-202ENST00000343090 NSRP1Q9H0G5 558 aaKnown RBP8.96□□□□□ -0.98
UBE4B-202ENST00000343090 CCDC169A6NNP5 214 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 CEP104O60308 925 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 TUBB2AQ13885 445 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 POLA2Q14181 598 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 PPP2R5BQ15173 497 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 CEP85LQ5SZL2 805 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 BLIDQ8IZY5 108 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 REXO1Q8N1G1 1221 aaKnown RBP8.95□□□□□ -0.98
UBE4B-202ENST00000343090 BCAS4Q8TDM0 211 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 TUBB2BQ9BVA1 445 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 PARD6BQ9BYG5 372 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 IMPG2Q9BZV3 1241 aa8.95□□□□□ -0.98
UBE4B-202ENST00000343090 CSRNP2Q9H175 543 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms