RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 LY9Q9HBG7 655 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 ATP1A2P50993 1020 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 HERVK_113P62684 666 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 PDCLQ13371 301 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 SAFBQ15424 915 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNX18-202ENST00000343017 AIDAQ96BJ3 306 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 EEF2KMTQ96G04 330 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 CTAGE1Q96RT6 745 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 PRDM11Q9NQV5 511 aa17.16■□□□□ 0.34
SNX18-202ENST00000343017 SRPRBQ9Y5M8 271 aaKnown RBP17.16■□□□□ 0.34
SNX18-202ENST00000343017 TTC26A0AVF1 554 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 WNT7AO00755 349 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 CTDSPL2Q05D32 466 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 KCTD16Q68DU8 428 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 TTLL7Q6ZT98 887 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 ELOA2Q8IYF1 753 aaPredicted RBP17.15■□□□□ 0.34
SNX18-202ENST00000343017 SH2D3CQ8N5H7 860 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 LACRTQ9GZZ8 138 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 FECHP22830 423 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 COPB1P53618 953 aaKnown RBP17.15■□□□□ 0.34
SNX18-202ENST00000343017 UBXN1Q04323 297 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 EARS2Q5JPH6 523 aaKnown RBP17.15■□□□□ 0.34
SNX18-202ENST00000343017 RRAGBQ5VZM2 374 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 GPIHBP1Q8IV16 184 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 SLC52A2Q9HAB3 445 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 SMARCAL1Q9NZC9 954 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 VPS54Q9P1Q0 977 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 MYO1AQ9UBC5 1043 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 DMGDHQ9UI17 866 aaKnown RBP17.15■□□□□ 0.34
SNX18-202ENST00000343017 SLC12A7Q9Y666 1083 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 C4AP0C0L4 1744 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 C4BP0C0L5 1744 aa17.15■□□□□ 0.34
SNX18-202ENST00000343017 H7C1W4 665 aa17.14■□□□□ 0.34
SNX18-202ENST00000343017 EIF3HO15372 352 aaKnown RBP eCLIP17.14■□□□□ 0.34
SNX18-202ENST00000343017 PPFIA1Q13136 1202 aa17.14■□□□□ 0.34
SNX18-202ENST00000343017 NBPF14Q5TI25 921 aa17.14■□□□□ 0.34
SNX18-202ENST00000343017 SYMPKQ92797 1274 aaKnown RBP17.14■□□□□ 0.34
SNX18-202ENST00000343017 CCDC51Q96ER9 411 aa17.14■□□□□ 0.34
SNX18-202ENST00000343017 CD248Q9HCU0 757 aa17.14■□□□□ 0.34
SNX18-202ENST00000343017 JADE2Q9NQC1 790 aa17.14■□□□□ 0.34
SNX18-202ENST00000343017 KDM4FA0A1W2PPD8 638 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 SHTN1A0MZ66 631 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 IFIT3O14879 490 aaKnown RBP17.14■□□□□ 0.33
SNX18-202ENST00000343017 ZEB2O60315 1214 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 CCDC172P0C7W6 258 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 TATP17735 454 aaPredicted RBP17.14■□□□□ 0.33
SNX18-202ENST00000343017 RRP12Q5JTH9 1297 aaKnown RBP17.14■□□□□ 0.33
SNX18-202ENST00000343017 PSMB7Q99436 277 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 ZSWIM5Q9P217 1185 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 TACC3Q9Y6A5 838 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 LTN1O94822 1766 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 MACROD2A1Z1Q3 448 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 H0YHG0 523 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 PSMD14O00487 310 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 FAM107BQ9H098 131 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 ZBTB3Q9H5J0 574 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 GPR108Q9NPR9 543 aa17.14■□□□□ 0.33
SNX18-202ENST00000343017 CYP27A1Q02318 531 aa17.13■□□□□ 0.33
SNX18-202ENST00000343017 KANK3Q6NY19 840 aa17.13■□□□□ 0.33
SNX18-202ENST00000343017 SMCR8Q8TEV9 937 aaPredicted RBP17.13■□□□□ 0.33
SNX18-202ENST00000343017 OVOS2A0A0G2JMS6 1433 aa17.13■□□□□ 0.33
SNX18-202ENST00000343017 ATP6V1AP38606 617 aa17.13■□□□□ 0.33
SNX18-202ENST00000343017 RILPL1Q5EBL4 403 aa17.13■□□□□ 0.33
SNX18-202ENST00000343017 TSEN2Q8NCE0 465 aaKnown RBP17.13■□□□□ 0.33
SNX18-202ENST00000343017 SUFUQ9UMX1 484 aa17.13■□□□□ 0.33
SNX18-202ENST00000343017 ZNF142P52746 1687 aaPredicted RBP17.13■□□□□ 0.33
SNX18-202ENST00000343017 LMO7Q8WWI1 1683 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 NDUFAB1O14561 156 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 IDH1O75874 414 aaKnown RBP17.12■□□□□ 0.33
SNX18-202ENST00000343017 FMNL1O95466 1100 aaPredicted RBP17.12■□□□□ 0.33
SNX18-202ENST00000343017 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
SNX18-202ENST00000343017 TDO2P48775 406 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 TOM1L2Q6ZVM7 507 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 BRINP3Q76B58 766 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 KIAA1328Q86T90 577 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 BANK1Q8NDB2 785 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 LRRC1Q9BTT6 524 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 EHD2Q9NZN4 543 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 ATP2B2Q01814 1243 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 TTF1Q15361 905 aaPredicted RBP17.12■□□□□ 0.33
SNX18-202ENST00000343017 CEP83Q9Y592 693 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 NFAT5O94916 1531 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 KCNJ18B7U540 433 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 ZFYP08048 801 aaPredicted RBP17.12■□□□□ 0.33
SNX18-202ENST00000343017 KCNJ12Q14500 433 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 TTMPQ5BVD1 217 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 WDR59Q6PJI9 974 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 NUP133Q8WUM0 1156 aa17.12■□□□□ 0.33
SNX18-202ENST00000343017 PAPD7Q5XG87 772 aaKnown RBP17.11■□□□□ 0.33
SNX18-202ENST00000343017 TTC5Q8N0Z6 440 aa17.11■□□□□ 0.33
SNX18-202ENST00000343017 PLBD2Q8NHP8 589 aa17.11■□□□□ 0.33
SNX18-202ENST00000343017 SHISA4Q96DD7 197 aa17.11■□□□□ 0.33
SNX18-202ENST00000343017 ITIH6Q6UXX5 1313 aa17.11■□□□□ 0.33
SNX18-202ENST00000343017 A0A0G2JS52 829 aa17.11■□□□□ 0.33
SNX18-202ENST00000343017 TRIM49BA6NDI0 452 aa17.11■□□□□ 0.33
SNX18-202ENST00000343017 ZNF174Q15697 407 aa17.11■□□□□ 0.33
SNX18-202ENST00000343017 TCP11X2Q5H9J9 407 aa17.11■□□□□ 0.33
SNX18-202ENST00000343017 ZNF579Q8NAF0 562 aaKnown RBP17.11■□□□□ 0.33
SNX18-202ENST00000343017 AENQ8WTP8 325 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms