RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TAB2Q9NYJ8 693 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 RSPH14Q9UHP6 348 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 KLHL30Q0D2K2 578 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 SUGCTQ9HAC7 445 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 SAMD15Q9P1V8 674 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 TMEM94Q12767 1356 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 LIG4P49917 911 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 PNMA1Q8ND90 353 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 PCDHB13Q9Y5F0 798 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 ZNF804BA4D1E1 1349 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 MAP3K15Q6ZN16 1313 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 PDE6AP16499 860 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 ARHGAP44Q17R89 818 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 CCDC121Q6ZUS5 278 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 NELFBQ8WX92 580 aa16.63■□□□□ 0.25
UBE3B-202ENST00000342494 MAST1Q9Y2H9 1570 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 PER1O15534 1290 aaPredicted RBP16.62■□□□□ 0.25
UBE3B-202ENST00000342494 ABL1P00519 1130 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
UBE3B-202ENST00000342494 STAMQ92783 540 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 EDC3Q96F86 508 aaKnown RBP16.62■□□□□ 0.25
UBE3B-202ENST00000342494 ERBB4Q15303 1308 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 KCTD2Q14681 263 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 GPBP1Q86WP2 473 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 UTP11Q9Y3A2 253 aaKnown RBP16.62■□□□□ 0.25
UBE3B-202ENST00000342494 KDRP35968 1356 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 HSPA1LP34931 641 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 CCNA1P78396 465 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 FANCCQ00597 558 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 ABCB5Q2M3G0 1257 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 C8orf74Q6P047 294 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 DPP9Q86TI2 863 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 CLSTN2Q9H4D0 955 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 ASIC3Q9UHC3 531 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 TMOD1P28289 359 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 SLFN13Q68D06 897 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 BLZF1Q9H2G9 400 aa16.62■□□□□ 0.25
UBE3B-202ENST00000342494 TMEM232C9JQI7 657 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 LRMPQ12912 555 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 NAPGQ99747 312 aaPredicted RBP16.61■□□□□ 0.25
UBE3B-202ENST00000342494 XDHP47989 1333 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 KLRF2D3W0D1 207 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 CCDC84Q86UT8 332 aaPredicted RBP16.61■□□□□ 0.25
UBE3B-202ENST00000342494 BLIDQ8IZY5 108 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 SECISBP2LQ93073 1101 aaKnown RBP16.61■□□□□ 0.25
UBE3B-202ENST00000342494 CCPG1Q9ULG6 757 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 KIAA0232Q92628 1395 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 ATF7P17544 494 aaPredicted RBP16.61■□□□□ 0.25
UBE3B-202ENST00000342494 MAGEA1P43355 309 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 CYP2J2P51589 502 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 CCDC110Q8TBZ0 833 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 ZBTB9Q96C00 473 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 IVLP07476 585 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 CASC4Q6P4E1 433 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 GPIHBP1Q8IV16 184 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 MYO1AQ9UBC5 1043 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 PCDHA12Q9UN75 941 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 NFE2L3Q9Y4A8 694 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 CLRN2A0PK11 232 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 TNNC2P02585 160 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 FAM184BQ9ULE4 1060 aa16.61■□□□□ 0.25
UBE3B-202ENST00000342494 MKRN1Q9UHC7 482 aaKnown RBP16.6■□□□□ 0.25
UBE3B-202ENST00000342494 AFG3L2Q9Y4W6 797 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 NPC1L1Q9UHC9 1359 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 JAK2O60674 1132 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 ZWINTO95229 277 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 GOLGA8HP0CJ92 632 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 SFMBT2Q5VUG0 894 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 SLFN12Q8IYM2 578 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 TEKT3Q9BXF9 490 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 H0YCG3 227 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 XRCC6P12956 609 aaKnown RBP eCLIP16.6■□□□□ 0.25
UBE3B-202ENST00000342494 NLRP12P59046 1061 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 PPP2R5CQ13362 524 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 VPS52Q8N1B4 723 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 MMS19Q96T76 1030 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 KRT27Q7Z3Y8 459 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 CMTR1Q8N1G2 835 aaKnown RBP16.6■□□□□ 0.25
UBE3B-202ENST00000342494 TRIM31Q9BZY9 425 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 TNKSO95271 1327 aa16.6■□□□□ 0.25
UBE3B-202ENST00000342494 YEATS2Q9ULM3 1422 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 SERPINB2P05120 415 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 PLA2G4DQ86XP0 818 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 NRBP2Q9NSY0 501 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 CAPN9O14815 690 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 CEP104O60308 925 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 GNA14O95837 355 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 CAPN2P17655 700 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 IGBP1P78318 339 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 THRAP3Q9Y2W1 955 aaKnown RBP16.59■□□□□ 0.25
UBE3B-202ENST00000342494 MAPKBP1O60336 1514 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 KRT26Q7Z3Y9 468 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 AFAP1L2Q8N4X5 818 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 TECP42680 631 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 VPS18Q9P253 973 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 POLA2Q14181 598 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 LRRC24Q50LG9 513 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 SYCE1Q8N0S2 351 aa16.59■□□□□ 0.25
UBE3B-202ENST00000342494 CFAP57Q96MR6 1250 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms