RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 RARSP54136 660 aaKnown RBP20.64■□□□□ 0.89
TRA2B-202ENST00000342294 COG2Q14746 738 aa20.64■□□□□ 0.89
TRA2B-202ENST00000342294 USP38Q8NB14 1042 aa20.64■□□□□ 0.89
TRA2B-202ENST00000342294 SPATC1LQ9H0A9 340 aa20.64■□□□□ 0.89
TRA2B-202ENST00000342294 HOXC10Q9NYD6 342 aa20.64■□□□□ 0.89
TRA2B-202ENST00000342294 PHF24Q9UPV7 400 aa20.64■□□□□ 0.89
TRA2B-202ENST00000342294 TACC3Q9Y6A5 838 aa20.64■□□□□ 0.89
TRA2B-202ENST00000342294 ERCC3P19447 782 aa20.63■□□□□ 0.89
TRA2B-202ENST00000342294 GRIN2CQ14957 1233 aa20.63■□□□□ 0.89
TRA2B-202ENST00000342294 FAM47AQ5JRC9 791 aa20.63■□□□□ 0.89
TRA2B-202ENST00000342294 TJAP1Q5JTD0 557 aa20.63■□□□□ 0.89
TRA2B-202ENST00000342294 TTC6Q86TZ1 520 aa20.63■□□□□ 0.89
TRA2B-202ENST00000342294 CERS3Q8IU89 383 aa20.63■□□□□ 0.89
TRA2B-202ENST00000342294 RNPC3Q96LT9 517 aaKnown RBP20.63■□□□□ 0.89
TRA2B-202ENST00000342294 CABP5Q9NP86 173 aa20.63■□□□□ 0.89
TRA2B-202ENST00000342294 A0A1W2PRG0 241 aa20.62■□□□□ 0.89
TRA2B-202ENST00000342294 KIAA0355O15063 1070 aa20.62■□□□□ 0.89
TRA2B-202ENST00000342294 MYCNP04198 464 aaPredicted RBP20.62■□□□□ 0.89
TRA2B-202ENST00000342294 COL9A1P20849 921 aa20.62■□□□□ 0.89
TRA2B-202ENST00000342294 USP5P45974 858 aa20.62■□□□□ 0.89
TRA2B-202ENST00000342294 ABRAQ8N0Z2 381 aa20.62■□□□□ 0.89
TRA2B-202ENST00000342294 MIGA1Q8NAN2 632 aa20.62■□□□□ 0.89
TRA2B-202ENST00000342294 CDH23Q9H251 3354 aa20.61■□□□□ 0.89
TRA2B-202ENST00000342294 CLTBP09497 229 aa20.61■□□□□ 0.89
TRA2B-202ENST00000342294 PLCD1P51178 756 aa20.61■□□□□ 0.89
TRA2B-202ENST00000342294 POLA2Q14181 598 aa20.61■□□□□ 0.89
TRA2B-202ENST00000342294 SEPT2Q15019 361 aa20.61■□□□□ 0.89
TRA2B-202ENST00000342294 MAML3Q96JK9 1138 aa20.61■□□□□ 0.89
TRA2B-202ENST00000342294 SLC5A4Q9NY91 659 aa20.61■□□□□ 0.89
TRA2B-202ENST00000342294 TNFRSF10AO00220 468 aa20.6■□□□□ 0.89
TRA2B-202ENST00000342294 GABPAQ06546 454 aa20.6■□□□□ 0.89
TRA2B-202ENST00000342294 MROH8Q9H579 483 aa20.6■□□□□ 0.89
TRA2B-202ENST00000342294 NRBP1Q9UHY1 535 aa20.6■□□□□ 0.89
TRA2B-202ENST00000342294 MYO5AQ9Y4I1 1855 aaKnown RBP20.6■□□□□ 0.89
TRA2B-202ENST00000342294 MYH1P12882 1939 aa20.59■□□□□ 0.89
TRA2B-202ENST00000342294 IDH1O75874 414 aaKnown RBP20.59■□□□□ 0.89
TRA2B-202ENST00000342294 DNAJB2P25686 324 aa20.59■□□□□ 0.89
TRA2B-202ENST00000342294 KIAA1755Q5JYT7 1200 aa20.59■□□□□ 0.89
TRA2B-202ENST00000342294 MB21D1Q8N884 522 aa20.59■□□□□ 0.89
TRA2B-202ENST00000342294 DBNLQ9UJU6 430 aaKnown RBP20.59■□□□□ 0.89
TRA2B-202ENST00000342294 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.58■□□□□ 0.89
TRA2B-202ENST00000342294 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.58■□□□□ 0.89
TRA2B-202ENST00000342294 DSG3P32926 999 aa20.58■□□□□ 0.89
TRA2B-202ENST00000342294 MAGEB6Q8N7X4 407 aa20.58■□□□□ 0.89
TRA2B-202ENST00000342294 TANGO6Q9C0B7 1094 aa20.58■□□□□ 0.89
TRA2B-202ENST00000342294 XPNPEP3Q9NQH7 507 aa20.58■□□□□ 0.89
TRA2B-202ENST00000342294 TNNQ9UQP3 1299 aa20.58■□□□□ 0.89
TRA2B-202ENST00000342294 A0A0G2JMZ2 1700 aa20.57■□□□□ 0.88
TRA2B-202ENST00000342294 TRIM27P14373 513 aa20.57■□□□□ 0.88
TRA2B-202ENST00000342294 RAG1P15918 1043 aa20.57■□□□□ 0.88
TRA2B-202ENST00000342294 FPGSQ05932 587 aa20.57■□□□□ 0.88
TRA2B-202ENST00000342294 TMED8Q6PL24 325 aaPredicted RBP20.57■□□□□ 0.88
TRA2B-202ENST00000342294 SSH3Q8TE77 659 aa20.57■□□□□ 0.88
TRA2B-202ENST00000342294 ZNF576Q9H609 170 aa20.57■□□□□ 0.88
TRA2B-202ENST00000342294 TLR7Q9NYK1 1049 aaKnown RBP20.57■□□□□ 0.88
TRA2B-202ENST00000342294 RARBP10826 455 aa20.56■□□□□ 0.88
TRA2B-202ENST00000342294 NCAPG2Q86XI2 1143 aa20.56■□□□□ 0.88
TRA2B-202ENST00000342294 TOX2Q96NM4 488 aa20.56■□□□□ 0.88
TRA2B-202ENST00000342294 RIOK1Q9BRS2 568 aaKnown RBP20.56■□□□□ 0.88
TRA2B-202ENST00000342294 A0A1W2PQ45 241 aaPredicted RBP20.55■□□□□ 0.88
TRA2B-202ENST00000342294 A0A1W2PQY0 241 aa20.55■□□□□ 0.88
TRA2B-202ENST00000342294 PGK1P00558 417 aa20.55■□□□□ 0.88
TRA2B-202ENST00000342294 FCER1AP12319 257 aa20.55■□□□□ 0.88
TRA2B-202ENST00000342294 EVX2Q03828 476 aa20.55■□□□□ 0.88
TRA2B-202ENST00000342294 FAAP100Q0VG06 881 aa20.55■□□□□ 0.88
TRA2B-202ENST00000342294 ANKRD33Q7Z3H0 272 aa20.55■□□□□ 0.88
TRA2B-202ENST00000342294 RNF180Q86T96 592 aa20.55■□□□□ 0.88
TRA2B-202ENST00000342294 ATG4CQ96DT6 458 aa20.55■□□□□ 0.88
TRA2B-202ENST00000342294 ANTXR1Q9H6X2 564 aa20.55■□□□□ 0.88
TRA2B-202ENST00000342294 TMEM39AQ9NV64 488 aa20.55■□□□□ 0.88
TRA2B-202ENST00000342294 ROBO3Q96MS0 1386 aa20.55■□□□□ 0.88
TRA2B-202ENST00000342294 MUC3AQ02505 3323 aa20.54■□□□□ 0.88
TRA2B-202ENST00000342294 PQBP1O60828 265 aaKnown RBP20.54■□□□□ 0.88
TRA2B-202ENST00000342294 ATP8B2P98198 1209 aa20.54■□□□□ 0.88
TRA2B-202ENST00000342294 OS9Q13438 667 aaPredicted RBP20.54■□□□□ 0.88
TRA2B-202ENST00000342294 PLS1Q14651 629 aa20.54■□□□□ 0.88
TRA2B-202ENST00000342294 SIAH1Q8IUQ4 282 aa20.54■□□□□ 0.88
TRA2B-202ENST00000342294 TIFAQ96CG3 184 aa20.54■□□□□ 0.88
TRA2B-202ENST00000342294 EAF2Q96CJ1 260 aaPredicted RBP20.54■□□□□ 0.88
TRA2B-202ENST00000342294 NOP58Q9Y2X3 529 aaKnown RBP20.54■□□□□ 0.88
TRA2B-202ENST00000342294 IPO8O15397 1037 aaKnown RBP20.53■□□□□ 0.88
TRA2B-202ENST00000342294 ADAMTS4O75173 837 aa20.53■□□□□ 0.88
TRA2B-202ENST00000342294 SURF6O75683 361 aaKnown RBP20.53■□□□□ 0.88
TRA2B-202ENST00000342294 POLR3DP05423 398 aaPredicted RBP20.53■□□□□ 0.88
TRA2B-202ENST00000342294 ZNF865P0CJ78 1059 aaPredicted RBP20.53■□□□□ 0.88
TRA2B-202ENST00000342294 TAL1P17542 331 aaPredicted RBP20.53■□□□□ 0.88
TRA2B-202ENST00000342294 MAP3K12Q12852 859 aa20.53■□□□□ 0.88
TRA2B-202ENST00000342294 ATXN2LQ8WWM7 1075 aaKnown RBP20.53■□□□□ 0.88
TRA2B-202ENST00000342294 TINF2Q9BSI4 451 aa20.53■□□□□ 0.88
TRA2B-202ENST00000342294 CCDC8Q9H0W5 538 aaPredicted RBP20.53■□□□□ 0.88
TRA2B-202ENST00000342294 RAPGEFL1Q9UHV5 662 aa20.53■□□□□ 0.88
TRA2B-202ENST00000342294 ADAMTS5Q9UNA0 930 aa20.53■□□□□ 0.88
TRA2B-202ENST00000342294 DIS3Q9Y2L1 958 aaKnown RBP20.53■□□□□ 0.88
TRA2B-202ENST00000342294 SMCHD1A6NHR9 2005 aa20.53■□□□□ 0.88
TRA2B-202ENST00000342294 MPHOSPH10O00566 681 aaKnown RBP20.52■□□□□ 0.88
TRA2B-202ENST00000342294 FLOT1O75955 427 aa20.52■□□□□ 0.88
TRA2B-202ENST00000342294 SLC25A27O95847 323 aa20.52■□□□□ 0.88
TRA2B-202ENST00000342294 TMEM132BQ14DG7 1078 aa20.52■□□□□ 0.88
TRA2B-202ENST00000342294 ZNF792Q3KQV3 632 aa20.52■□□□□ 0.88
TRA2B-202ENST00000342294 AKNAD1Q5T1N1 836 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms