RNA–Protein interactions for RNA: ENST00000340994.4

PKHD1-201, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PKHD1, Length 11,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-201ENST00000340994 GOLGA8CPA6NN73 597 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 PFDN6O15212 129 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 ZPR1O75312 459 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 DDX54Q8TDD1 881 aaKnown RBP9.04□□□□□ -0.96
PKHD1-201ENST00000340994 VPS37BQ9H9H4 285 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 INTS9Q9NV88 658 aaKnown RBP9.04□□□□□ -0.96
PKHD1-201ENST00000340994 CHGBP05060 677 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 VPS41P49754 854 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 ATP1A2P50993 1020 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 TERF2Q15554 542 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 KRT80Q6KB66 452 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 RETREG2Q8NC44 543 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 HAUS7Q99871 368 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 CDC23Q9UJX2 597 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 HARSP12081 509 aaKnown RBP9.04□□□□□ -0.96
PKHD1-201ENST00000340994 RSBN1LQ6PCB5 846 aaPredicted RBP9.04□□□□□ -0.96
PKHD1-201ENST00000340994 MYD88Q99836 296 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 ZBTB12Q9Y330 459 aaPredicted RBP9.04□□□□□ -0.96
PKHD1-201ENST00000340994 BLMP54132 1417 aaPredicted RBP9.04□□□□□ -0.96
PKHD1-201ENST00000340994 OCA2Q04671 838 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 CDAN1Q8IWY9 1227 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 CALR3Q96L12 384 aaKnown RBP9.04□□□□□ -0.96
PKHD1-201ENST00000340994 CFAP73A6NFT4 308 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 MYO1CO00159 1063 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 HSPA6P17066 643 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 RBM6P78332 1123 aaKnown RBP9.04□□□□□ -0.96
PKHD1-201ENST00000340994 PLEKHM2Q8IWE5 1019 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 STOML1Q9UBI4 398 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 STX8Q9UNK0 236 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 COPG1Q9Y678 874 aaKnown RBP9.04□□□□□ -0.96
PKHD1-201ENST00000340994 HAND2P61296 217 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 NBPF20Q3BBV1 942 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 ESCO1Q5FWF5 840 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 TOM1L2Q6ZVM7 507 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 CAPRIN2Q6IMN6 1127 aaKnown RBP9.03□□□□□ -0.96
PKHD1-201ENST00000340994 SRRM1Q8IYB3 904 aaKnown RBP9.03□□□□□ -0.96
PKHD1-201ENST00000340994 KDM3AQ9Y4C1 1321 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 RGS12O14924 1447 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 VWA3AA6NCI4 1184 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 KRT5P13647 590 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 CHMLP26374 656 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 DNM2P50570 870 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 KLHL30Q0D2K2 578 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 MTX1Q13505 466 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 PSPC1Q8WXF1 523 aaKnown RBP9.03□□□□□ -0.96
PKHD1-201ENST00000340994 FRMD3A2A2Y4 597 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 RASA3Q14644 834 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 TEKT1Q969V4 418 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 TMOD3Q9NYL9 352 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 PPM1FP49593 454 aaPredicted RBP9.03□□□□□ -0.96
PKHD1-201ENST00000340994 STX17P56962 302 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 UBE3BQ7Z3V4 1068 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 CATSPER1Q8NEC5 780 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 RNF113AO15541 343 aaKnown RBP9.03□□□□□ -0.96
PKHD1-201ENST00000340994 RSAD2Q8WXG1 361 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 POGZQ7Z3K3 1410 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 RASSF10A6NK89 507 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 HDAC4P56524 1084 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 ATP8B2P98198 1209 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 RRS1Q15050 365 aaKnown RBP9.03□□□□□ -0.96
PKHD1-201ENST00000340994 MGARPQ8TDB4 240 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 TCP11Q8WWU5 503 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 NELFBQ8WX92 580 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 PPWD1Q96BP3 646 aaKnown RBP9.03□□□□□ -0.96
PKHD1-201ENST00000340994 XPO4Q9C0E2 1151 aaKnown RBP9.03□□□□□ -0.96
PKHD1-201ENST00000340994 HNRNPCL1O60812 293 aaKnown RBP9.03□□□□□ -0.96
PKHD1-201ENST00000340994 MAGEA1P43355 309 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 FAM96AQ9H5X1 160 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 PCDHB15Q9Y5E8 787 aa9.03□□□□□ -0.96
PKHD1-201ENST00000340994 MAGI1Q96QZ7 1491 aaPredicted RBP9.03□□□□□ -0.96
PKHD1-201ENST00000340994 POLE2P56282 527 aa9.02□□□□□ -0.96
PKHD1-201ENST00000340994 MMEL1Q495T6 779 aa9.02□□□□□ -0.96
PKHD1-201ENST00000340994 JADE1Q6IE81 842 aa9.02□□□□□ -0.96
PKHD1-201ENST00000340994 STAMBPL1Q96FJ0 436 aa9.02□□□□□ -0.96
PKHD1-201ENST00000340994 ANGEL1Q9UNK9 670 aaKnown RBP9.02□□□□□ -0.96
PKHD1-201ENST00000340994 POLR2DO15514 142 aaKnown RBP9.02□□□□□ -0.96
PKHD1-201ENST00000340994 GUCY2FP51841 1108 aa9.02□□□□□ -0.96
PKHD1-201ENST00000340994 KPNA2P52292 529 aaKnown RBP9.02□□□□□ -0.96
PKHD1-201ENST00000340994 ZC3H18Q86VM9 953 aaKnown RBP9.02□□□□□ -0.96
PKHD1-201ENST00000340994 KLHL7Q8IXQ5 586 aa9.02□□□□□ -0.96
PKHD1-201ENST00000340994 MAD1L1Q9Y6D9 718 aa9.02□□□□□ -0.96
PKHD1-201ENST00000340994 LONRF2Q1L5Z9 754 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 TRIM31Q9BZY9 425 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 GARSP41250 739 aaKnown RBP9.02□□□□□ -0.97
PKHD1-201ENST00000340994 FGD4Q96M96 766 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 ANKRD35Q8N283 1001 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.02□□□□□ -0.97
PKHD1-201ENST00000340994 DUOX2Q9NRD8 1548 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 MCF2P10911 925 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 CDKL2Q92772 493 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 RPGRQ92834 1020 aaKnown RBP9.02□□□□□ -0.97
PKHD1-201ENST00000340994 PPP1R13BQ96KQ4 1090 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 KIAA1468Q9P260 1216 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 KCNJ18B7U540 433 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 NR1D1P20393 614 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 KCNJ12Q14500 433 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 TMEM87AQ8NBN3 555 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 ABCC5O15440 1437 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 ATF2P15336 505 aa9.02□□□□□ -0.97
PKHD1-201ENST00000340994 GLE1Q53GS7 698 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms