RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 DDIT3P35638 169 aa15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 FMR1Q06787 632 aaKnown RBP eCLIP15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 NTRK3Q16288 839 aa15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.56■□□□□ 0.082e-7■■□□□ 14.3
GTF2F2-201ENST00000340473 SMC3Q9UQE7 1217 aa15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 PAPPA2Q9BXP8 1791 aa15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 CPLX1O14810 134 aa15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 DHX16O60231 1041 aaKnown RBP15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 ECE1P42892 770 aa15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 GRM4Q14833 912 aa15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 SCYL3Q8IZE3 742 aa15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 CMTR1Q8N1G2 835 aaKnown RBP15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 ACER1Q8TDN7 264 aa15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 LLPHQ9BRT6 129 aaKnown RBP15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 OTOFQ9HC10 1997 aa15.56■□□□□ 0.08
GTF2F2-201ENST00000340473 PTPDC1A2A3K4 754 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 USP17L5A8MUK1 530 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 PPP1R12BO60237 982 aaPredicted RBP15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 GJB2P29033 226 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 NF2P35240 595 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 CTCFLQ8NI51 663 aaPredicted RBP15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 SMARCC2Q8TAQ2 1214 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 DDX11Q96FC9 970 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 MAP3K14Q99558 947 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 MAD2L2Q9UI95 211 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 PLEKHA8P1O95397 391 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 PDHBP11177 359 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 MOB2Q70IA6 237 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 STAG2Q8N3U4 1231 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 CWC22Q9HCG8 908 aaKnown RBP15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 GINM1Q9NU53 330 aa15.55■□□□□ 0.08
GTF2F2-201ENST00000340473 CCDC196A0A1B0GTZ2 297 aa15.54■□□□□ 0.08
GTF2F2-201ENST00000340473 GOLGA8HP0CJ92 632 aa15.54■□□□□ 0.08
GTF2F2-201ENST00000340473 PPP2R5BQ15173 497 aa15.54■□□□□ 0.08
GTF2F2-201ENST00000340473 NOL9Q5SY16 702 aaKnown RBP15.54■□□□□ 0.08
GTF2F2-201ENST00000340473 USP17L2Q6R6M4 530 aa15.54■□□□□ 0.08
GTF2F2-201ENST00000340473 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.54■□□□□ 0.08
GTF2F2-201ENST00000340473 ARHGEF10LQ9HCE6 1279 aa15.54■□□□□ 0.08
GTF2F2-201ENST00000340473 RBM28Q9NW13 759 aaKnown RBP15.54■□□□□ 0.08
GTF2F2-201ENST00000340473 RAD21O60216 631 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 SNHG28P0DPA3 235 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 PTPRAP18433 802 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 TMTC3Q6ZXV5 915 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 CCDC82Q8N4S0 544 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 PHKBQ93100 1093 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 PALM3A6NDB9 673 aaPredicted RBP15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 PARP1P09874 1014 aaKnown RBP15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 FDPSP14324 419 aaKnown RBP15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 IFNAR1P17181 557 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 KIF5BP33176 963 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 IREB2P48200 963 aaKnown RBP15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 MAP3K9P80192 1104 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 FUT2Q10981 343 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 VGLL4Q14135 290 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 NBPF11Q86T75 865 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 GMCL1P1Q8NEA9 526 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 PICK1Q9NRD5 415 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 TMX2Q9Y320 296 aa15.53■□□□□ 0.08
GTF2F2-201ENST00000340473 CDKL5O76039 1030 aa15.52■□□□□ 0.08
GTF2F2-201ENST00000340473 TTLL12Q14166 644 aaPredicted RBP15.52■□□□□ 0.08
GTF2F2-201ENST00000340473 KIAA1755Q5JYT7 1200 aa15.52■□□□□ 0.08
GTF2F2-201ENST00000340473 SLFN13Q68D06 897 aa15.52■□□□□ 0.08
GTF2F2-201ENST00000340473 CPLX2Q6PUV4 134 aaKnown RBP15.52■□□□□ 0.08
GTF2F2-201ENST00000340473 SRBD1Q8N5C6 995 aaKnown RBP15.52■□□□□ 0.08
GTF2F2-201ENST00000340473 ZNF408Q9H9D4 720 aa15.52■□□□□ 0.08
GTF2F2-201ENST00000340473 GPBP1L1Q9HC44 474 aaPredicted RBP15.52■□□□□ 0.08
GTF2F2-201ENST00000340473 SYNPO2Q9UMS6 1093 aa15.52■□□□□ 0.08
GTF2F2-201ENST00000340473 SNCAIPQ9Y6H5 919 aa15.52■□□□□ 0.08
GTF2F2-201ENST00000340473 FRMPD2Q68DX3 1309 aaPredicted RBP15.52■□□□□ 0.08
GTF2F2-201ENST00000340473 F5H6K3 240 aa15.52■□□□□ 0.07
GTF2F2-201ENST00000340473 UBE2Q2LH0YL09 131 aa15.52■□□□□ 0.07
GTF2F2-201ENST00000340473 NDUFB10O96000 172 aa15.52■□□□□ 0.07
GTF2F2-201ENST00000340473 HMGN5P82970 282 aaKnown RBP15.52■□□□□ 0.07
GTF2F2-201ENST00000340473 KLRC3Q07444 240 aa15.52■□□□□ 0.07
GTF2F2-201ENST00000340473 MAP3K11Q16584 847 aa15.52■□□□□ 0.07
GTF2F2-201ENST00000340473 PHIPQ8WWQ0 1821 aa15.52■□□□□ 0.07
GTF2F2-201ENST00000340473 ZNF543Q08ER8 600 aa15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 ZYXQ15942 572 aaKnown RBP15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 SLC35G1Q2M3R5 365 aa15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 SPICE1Q8N0Z3 855 aa15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 SLC26A6Q9BXS9 759 aa15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 CPVLQ9H3G5 476 aa15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 CNTNAP5Q8WYK1 1306 aa15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 FMNL1O95466 1100 aaPredicted RBP15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 PKP1Q13835 747 aa15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 KCTD1Q719H9 257 aa15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 CLMNQ96JQ2 1002 aa15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 NUP88Q99567 741 aaPredicted RBP15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 SH2D4AQ9H788 454 aa15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 ORC3Q9UBD5 711 aaPredicted RBP15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 ZHX2Q9Y6X8 837 aa15.51■□□□□ 0.07
GTF2F2-201ENST00000340473 KLRF2D3W0D1 207 aa15.5■□□□□ 0.07
GTF2F2-201ENST00000340473 ITGBL1O95965 494 aaPredicted RBP15.5■□□□□ 0.07
GTF2F2-201ENST00000340473 SLC1A4P43007 532 aa15.5■□□□□ 0.07
GTF2F2-201ENST00000340473 SSRP1Q08945 709 aaKnown RBP15.5■□□□□ 0.07
GTF2F2-201ENST00000340473 CCDC96Q2M329 555 aa15.5■□□□□ 0.07
GTF2F2-201ENST00000340473 ASPRV1Q53RT3 343 aa15.5■□□□□ 0.07
GTF2F2-201ENST00000340473 DCAF4Q8WV16 495 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms