RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 BRAPQ7Z569 592 aa24.55■■□□□ 1.52
VRK2-201ENST00000340157 TMEM63CQ9P1W3 806 aa24.55■■□□□ 1.52
VRK2-201ENST00000340157 ZNF541Q9H0D2 1346 aa24.54■■□□□ 1.52
VRK2-201ENST00000340157 U2AF2P26368 475 aaKnown RBP eCLIP24.54■■□□□ 1.523e-7■■■■□ 20.2
VRK2-201ENST00000340157 EIF6P56537 245 aaKnown RBP24.54■■□□□ 1.52
VRK2-201ENST00000340157 CCDC17Q96LX7 622 aa24.54■■□□□ 1.52
VRK2-201ENST00000340157 VEGFAP15692 232 aaPredicted RBP24.53■■□□□ 1.52
VRK2-201ENST00000340157 RPS12P25398 132 aaKnown RBP24.53■■□□□ 1.52
VRK2-201ENST00000340157 AKAP17AQ02040 695 aaKnown RBP24.53■■□□□ 1.52
VRK2-201ENST00000340157 MYSM1Q5VVJ2 828 aa24.53■■□□□ 1.52
VRK2-201ENST00000340157 ILDR2Q71H61 639 aa24.53■■□□□ 1.52
VRK2-201ENST00000340157 FAM151AQ8WW52 585 aa24.53■■□□□ 1.52
VRK2-201ENST00000340157 CSRNP1Q96S65 589 aa24.53■■□□□ 1.52
VRK2-201ENST00000340157 CFAP45Q9UL16 551 aa24.53■■□□□ 1.52
VRK2-201ENST00000340157 CYTH3O43739 400 aa24.53■■□□□ 1.52
VRK2-201ENST00000340157 GMPSP49915 693 aaPredicted RBP24.53■■□□□ 1.52
VRK2-201ENST00000340157 CEBPZQ03701 1054 aaKnown RBP24.53■■□□□ 1.52
VRK2-201ENST00000340157 FKBP1CQ5VVH2 108 aa24.53■■□□□ 1.52
VRK2-201ENST00000340157 ATL3Q6DD88 541 aa24.53■■□□□ 1.52
VRK2-201ENST00000340157 CDAN1Q8IWY9 1227 aa24.53■■□□□ 1.52
VRK2-201ENST00000340157 LRRC47Q8N1G4 583 aaKnown RBP24.53■■□□□ 1.52
VRK2-201ENST00000340157 VPS54Q9P1Q0 977 aa24.53■■□□□ 1.52
VRK2-201ENST00000340157 GOLGA8HP0CJ92 632 aa24.52■■□□□ 1.52
VRK2-201ENST00000340157 RRP1BQ14684 758 aaKnown RBP24.52■■□□□ 1.52
VRK2-201ENST00000340157 CERKLQ49MI3 558 aaPredicted RBP24.52■■□□□ 1.52
VRK2-201ENST00000340157 TPRNQ4KMQ1 711 aa24.52■■□□□ 1.52
VRK2-201ENST00000340157 PGBD1Q96JS3 809 aa24.52■■□□□ 1.52
VRK2-201ENST00000340157 VEZTQ9HBM0 779 aa24.52■■□□□ 1.52
VRK2-201ENST00000340157 MPHOSPH10O00566 681 aaKnown RBP24.51■■□□□ 1.51
VRK2-201ENST00000340157 TTLL1O95922 423 aa24.51■■□□□ 1.51
VRK2-201ENST00000340157 USP17L2Q6R6M4 530 aa24.51■■□□□ 1.51
VRK2-201ENST00000340157 ZNF396Q96N95 335 aaPredicted RBP24.51■■□□□ 1.51
VRK2-201ENST00000340157 CLIP2Q9UDT6 1046 aa24.51■■□□□ 1.51
VRK2-201ENST00000340157 RCOR1Q9UKL0 485 aa24.51■■□□□ 1.51
VRK2-201ENST00000340157 USP17L5A8MUK1 530 aa24.51■■□□□ 1.51
VRK2-201ENST00000340157 BTBD18B2RXH4 712 aa24.51■■□□□ 1.51
VRK2-201ENST00000340157 JAG1P78504 1218 aa24.51■■□□□ 1.51
VRK2-201ENST00000340157 DIS3L2Q8IYB7 885 aaKnown RBP24.51■■□□□ 1.51
VRK2-201ENST00000340157 PGAP2Q9UHJ9 254 aa24.51■■□□□ 1.51
VRK2-201ENST00000340157 PDHBP11177 359 aa24.5■■□□□ 1.51
VRK2-201ENST00000340157 GNAQP50148 359 aa24.5■■□□□ 1.51
VRK2-201ENST00000340157 PFKFB3Q16875 520 aaPredicted RBP24.5■■□□□ 1.51
VRK2-201ENST00000340157 PIBF1Q8WXW3 757 aa24.5■■□□□ 1.51
VRK2-201ENST00000340157 PHF20Q9BVI0 1012 aa24.5■■□□□ 1.51
VRK2-201ENST00000340157 TMEM39BQ9GZU3 492 aa24.5■■□□□ 1.51
VRK2-201ENST00000340157 CPVLQ9H3G5 476 aa24.5■■□□□ 1.51
VRK2-201ENST00000340157 GJA3Q9Y6H8 435 aa24.5■■□□□ 1.51
VRK2-201ENST00000340157 PARP1P09874 1014 aaKnown RBP24.49■■□□□ 1.51
VRK2-201ENST00000340157 SNHG28P0DPA3 235 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 SCG2P13521 617 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 NPY5RQ15761 445 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 ZSCAN23Q3MJ62 389 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 ARHGAP27Q6ZUM4 889 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 MICALL2Q8IY33 904 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 OXER1Q8TDS5 423 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 DPF2Q92785 391 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 TRIM34Q9BYJ4 488 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 RTEL1Q9NZ71 1219 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 CLIC4Q9Y696 253 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 KLRF2D3W0D1 207 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 GDF11O95390 407 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 MMP14P50281 582 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 FAM83AQ86UY5 434 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 SIAH1Q8IUQ4 282 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 SYT17Q9BSW7 474 aa24.49■■□□□ 1.51
VRK2-201ENST00000340157 NR5A1Q13285 461 aa24.48■■□□□ 1.51
VRK2-201ENST00000340157 FOXP1Q9H334 677 aaPredicted RBP24.48■■□□□ 1.51
VRK2-201ENST00000340157 MYO1BO43795 1136 aa24.47■■□□□ 1.51
VRK2-201ENST00000340157 DEKP35659 375 aaKnown RBP24.47■■□□□ 1.51
VRK2-201ENST00000340157 SEPT2Q15019 361 aa24.47■■□□□ 1.51
VRK2-201ENST00000340157 SAMD7Q7Z3H4 446 aa24.47■■□□□ 1.51
VRK2-201ENST00000340157 NOSTRINQ8IVI9 506 aa24.47■■□□□ 1.51
VRK2-201ENST00000340157 POLR3EQ9NVU0 708 aa24.47■■□□□ 1.51
VRK2-201ENST00000340157 HERC5Q9UII4 1024 aaKnown RBP24.47■■□□□ 1.51
VRK2-201ENST00000340157 CNOT7Q9UIV1 285 aaKnown RBP24.47■■□□□ 1.51
VRK2-201ENST00000340157 SCAF8Q9UPN6 1271 aaKnown RBP24.47■■□□□ 1.51
VRK2-201ENST00000340157 NASPP49321 788 aaPredicted RBP24.47■■□□□ 1.51
VRK2-201ENST00000340157 RBM26Q5T8P6 1007 aaKnown RBP24.47■■□□□ 1.51
VRK2-201ENST00000340157 LINC00301Q8NCQ3 95 aa24.47■■□□□ 1.51
VRK2-201ENST00000340157 LZTS2Q9BRK4 669 aa24.47■■□□□ 1.51
VRK2-201ENST00000340157 SPZ1Q9BXG8 430 aa24.47■■□□□ 1.51
VRK2-201ENST00000340157 ASTN2O75129 1339 aaPredicted RBP24.47■■□□□ 1.51
VRK2-201ENST00000340157 LMNB1P20700 586 aa24.46■■□□□ 1.51
VRK2-201ENST00000340157 GNL2Q13823 731 aaKnown RBP24.46■■□□□ 1.51
VRK2-201ENST00000340157 SAFBQ15424 915 aaKnown RBP eCLIP24.46■■□□□ 1.51
VRK2-201ENST00000340157 ABCB5Q2M3G0 1257 aa24.46■■□□□ 1.51
VRK2-201ENST00000340157 TMEM179Q6ZVK1 233 aa24.46■■□□□ 1.51
VRK2-201ENST00000340157 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.46■■□□□ 1.51
VRK2-201ENST00000340157 EEF2P13639 858 aaKnown RBP24.45■■□□□ 1.51
VRK2-201ENST00000340157 GPKOWQ92917 476 aaPredicted RBP eCLIP24.45■■□□□ 1.51
VRK2-201ENST00000340157 KANSL2Q9H9L4 492 aa24.45■■□□□ 1.51
VRK2-201ENST00000340157 NYAP2Q9P242 653 aa24.45■■□□□ 1.51
VRK2-201ENST00000340157 FRMPD2Q68DX3 1309 aaPredicted RBP24.45■■□□□ 1.51
VRK2-201ENST00000340157 ADAMTS3O15072 1205 aa24.45■■□□□ 1.5
VRK2-201ENST00000340157 XBP1P17861 261 aa24.45■■□□□ 1.5
VRK2-201ENST00000340157 LIG1P18858 919 aa24.45■■□□□ 1.5
VRK2-201ENST00000340157 ATP2B2Q01814 1243 aa24.45■■□□□ 1.5
VRK2-201ENST00000340157 ANO1Q5XXA6 986 aa24.45■■□□□ 1.5
VRK2-201ENST00000340157 TYW1BQ6NUM6 668 aa24.45■■□□□ 1.5
VRK2-201ENST00000340157 GAS2L3Q86XJ1 694 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms