RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ACRBPQ8NEB7 543 aa13□□□□□ -0.33
SHANK2-201ENST00000338508 CCDC68Q9H2F9 335 aa13□□□□□ -0.33
SHANK2-201ENST00000338508 FAM207AQ9NSI2 230 aaPredicted RBP13□□□□□ -0.33
SHANK2-201ENST00000338508 PLB1Q6P1J6 1458 aa13□□□□□ -0.33
SHANK2-201ENST00000338508 H7C1D1 291 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 DLATP10515 647 aaKnown RBP12.99□□□□□ -0.33
SHANK2-201ENST00000338508 RAPH1Q70E73 1250 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 TCP10L2B9ZVM9 353 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 DKC1O60832 514 aaKnown RBP eCLIP12.99□□□□□ -0.331e-6■■■■■ 39.3
SHANK2-201ENST00000338508 STAM2O75886 525 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 COG7P83436 770 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
SHANK2-201ENST00000338508 CCDC13Q8IYE1 715 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 CARD6Q9BX69 1037 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 KCNJ14Q9UNX9 436 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 NOS1P29475 1434 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 TSNAXIP1Q2TAA8 658 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 TTC38Q5R3I4 469 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 PHLDB2Q86SQ0 1253 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 NELFBQ8WX92 580 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 KCNH3Q9ULD8 1083 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 MYSM1Q5VVJ2 828 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 RRAGAQ7L523 313 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 U2AF1L4Q8WU68 220 aaKnown RBP12.99□□□□□ -0.33
SHANK2-201ENST00000338508 ANAPC5Q9UJX4 755 aa12.99□□□□□ -0.33
SHANK2-201ENST00000338508 PPIP5K2O43314 1243 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 STMN1P16949 149 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 ALKBH8Q96BT7 664 aaKnown RBP12.98□□□□□ -0.33
SHANK2-201ENST00000338508 LSM14BQ9BX40 385 aaKnown RBP12.98□□□□□ -0.33
SHANK2-201ENST00000338508 INPP5BP32019 993 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 ATP6V1E1P36543 226 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 LRWD1Q9UFC0 647 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 DHX29Q7Z478 1369 aaKnown RBP12.98□□□□□ -0.33
SHANK2-201ENST00000338508 BNIP3LO60238 219 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 ALAS1P13196 640 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 FBXW4P57775 412 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 CDC26Q8NHZ8 85 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
SHANK2-201ENST00000338508 MAD1L1Q9Y6D9 718 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 NPHP3Q7Z494 1330 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 DEXIO95424 95 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 THRAP3Q9Y2W1 955 aaKnown RBP12.98□□□□□ -0.33
SHANK2-201ENST00000338508 BRD3Q15059 726 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.98□□□□□ -0.332e-6■■■■■ 57.2
SHANK2-201ENST00000338508 GANCQ8TET4 914 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 GAS7O60861 476 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 GIGYF1O75420 1035 aaPredicted RBP12.98□□□□□ -0.33
SHANK2-201ENST00000338508 LIG4P49917 911 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 MKRN3Q13064 507 aaKnown RBP12.98□□□□□ -0.33
SHANK2-201ENST00000338508 OTUD6AQ7L8S5 288 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 TRMT44Q8IYL2 757 aaKnown RBP12.98□□□□□ -0.33
SHANK2-201ENST00000338508 SLF1Q9BQI6 1058 aa12.98□□□□□ -0.33
SHANK2-201ENST00000338508 SYNDIG1LA6NDD5 238 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 PPFIA2O75334 1257 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 DLGAP5Q15398 846 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
SHANK2-201ENST00000338508 ARHGAP24Q8N264 748 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 BAIAP2L1Q9UHR4 511 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 NUB1Q9Y5A7 615 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 ANGPTL3Q9Y5C1 460 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 EFCAB5A4FU69 1503 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 APBA3O96018 575 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 MUM1Q2TAK8 710 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 SFMBT2Q5VUG0 894 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 DISC1Q9NRI5 854 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 SUFUQ9UMX1 484 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
SHANK2-201ENST00000338508 HSPA2P54652 639 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 PHEXP78562 749 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 CABP7Q86V35 215 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 PCDHB15Q9Y5E8 787 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 RPS6KA1Q15418 735 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 PGBD1Q96JS3 809 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 SERPINB6P35237 376 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 KRT33BQ14525 404 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 PUM3Q15397 648 aaKnown RBP12.97□□□□□ -0.33
SHANK2-201ENST00000338508 ANKRD35Q8N283 1001 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 FAM71BQ8TC56 605 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 STX2P32856 288 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 ADCY8P40145 1251 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 FAM173BQ6P4H8 233 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 MIER3Q7Z3K6 550 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 ABI1Q8IZP0 508 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 HELLSQ9NRZ9 838 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 VPS54Q9P1Q0 977 aa12.97□□□□□ -0.33
SHANK2-201ENST00000338508 BUB1O43683 1085 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 PPP1R16BQ96T49 567 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 PDE6AP16499 860 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 MAGEA1P43355 309 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 MTX1Q13505 466 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 C17orf53Q8N3J3 647 aaPredicted RBP12.96□□□□□ -0.33
SHANK2-201ENST00000338508 SEPT8Q92599 483 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 XAGE2Q96GT9 111 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 RAB20Q9NX57 234 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 USH1CQ9Y6N9 552 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 KDRP35968 1356 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 TIAM1Q13009 1591 aa12.96□□□□□ -0.33
SHANK2-201ENST00000338508 DBN1Q16643 649 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms