RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 SHMT1P34896 483 aa12.55□□□□□ -0.4
MS4A4A-201ENST00000337908 ZNF445P59923 1031 aa12.55□□□□□ -0.4
MS4A4A-201ENST00000337908 CERKLQ49MI3 558 aaPredicted RBP12.55□□□□□ -0.4
MS4A4A-201ENST00000337908 CCDC73Q6ZRK6 1079 aa12.55□□□□□ -0.4
MS4A4A-201ENST00000337908 JMYQ8N9B5 988 aa12.55□□□□□ -0.4
MS4A4A-201ENST00000337908 GMLQ99445 158 aa12.55□□□□□ -0.4
MS4A4A-201ENST00000337908 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.55□□□□□ -0.4
MS4A4A-201ENST00000337908 VEZTQ9HBM0 779 aa12.55□□□□□ -0.4
MS4A4A-201ENST00000337908 POLR3EQ9NVU0 708 aa12.55□□□□□ -0.4
MS4A4A-201ENST00000337908 MTMR4Q9NYA4 1195 aa12.55□□□□□ -0.4
MS4A4A-201ENST00000337908 TMEM63CQ9P1W3 806 aa12.55□□□□□ -0.4
MS4A4A-201ENST00000337908 NOL7Q9UMY1 257 aaKnown RBP12.55□□□□□ -0.4
MS4A4A-201ENST00000337908 ATRNL1Q5VV63 1379 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 CLRN2A0PK11 232 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 DDTLA6NHG4 134 aaPredicted RBP12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 KIF28PB7ZC32 967 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 NFKBIEO00221 500 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 U2AF2P26368 475 aaKnown RBP eCLIP12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 CALML3P27482 149 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 TNNI2P48788 182 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 NLRP5P59047 1200 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 ATP2B2Q01814 1243 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 FUT2Q10981 343 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 PFKFB3Q16875 520 aaPredicted RBP12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 ASPRV1Q53RT3 343 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 ANO1Q5XXA6 986 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 NOSTRINQ8IVI9 506 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 ZFPM1Q8IX07 1006 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 MTMR14Q8NCE2 650 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 CSRNP1Q96S65 589 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 CABP5Q9NP86 173 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 VPS54Q9P1Q0 977 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 CLIP2Q9UDT6 1046 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 SEC63Q9UGP8 760 aaKnown RBP12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 KCNJ14Q9UNX9 436 aa12.54□□□□□ -0.4
MS4A4A-201ENST00000337908 SYCE3A1L190 88 aa12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 KLRF2D3W0D1 207 aa12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 MRE11P49959 708 aa12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 RILPL1Q5EBL4 403 aa12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 CCDC12Q8WUD4 166 aaPredicted RBP12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 FAM151AQ8WW52 585 aa12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 PIBF1Q8WXW3 757 aa12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 RRP36Q96EU6 259 aaKnown RBP12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 SH3GLB2Q9NR46 395 aa12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 DDX19AQ9NUU7 478 aaKnown RBP12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 MAD2L2Q9UI95 211 aa12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 HERC5Q9UII4 1024 aaKnown RBP12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
MS4A4A-201ENST00000337908 IGKV6D-41A0A0C4DH26 115 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 hCG_1642624A0A1W2PR95 340 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 PALM3A6NDB9 673 aaPredicted RBP12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 BTBD18B2RXH4 712 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 UBE2Q2LH0YL09 131 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 SPTLC2O15270 562 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 SMARCA1P28370 1054 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 NOVP48745 357 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 NASPP49321 788 aaPredicted RBP12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 RASSF7Q02833 373 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 PKN1Q16512 942 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 ABCB5Q2M3G0 1257 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 RBM26Q5T8P6 1007 aaKnown RBP12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 FKBP1CQ5VVH2 108 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 TMEM179Q6ZVK1 233 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 FAM177A1Q8N128 213 aaPredicted RBP12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 PHF20Q9BVI0 1012 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 SPZ1Q9BXG8 430 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 KANSL2Q9H9L4 492 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 CLIC4Q9Y696 253 aa12.52□□□□□ -0.4
MS4A4A-201ENST00000337908 SIPA1L1O43166 1804 aa12.52□□□□□ -0.41
MS4A4A-201ENST00000337908 MYH4Q9Y623 1939 aa12.52□□□□□ -0.41
MS4A4A-201ENST00000337908 TNFAIP1Q13829 316 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 CCDC96Q2M329 555 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 LRSAM1Q6UWE0 723 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 CCAR1Q8IX12 1150 aaKnown RBP12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 LRRC47Q8N1G4 583 aaKnown RBP12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 STAG2Q8N3U4 1231 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 LINC00301Q8NCQ3 95 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 FTOQ9C0B1 505 aaKnown RBP eCLIP12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 NUP62CLQ9H1M0 184 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 MYOZ2Q9NPC6 264 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 GJA3Q9Y6H8 435 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 GREB1LQ9C091 1923 aaPredicted RBP12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 RAD21O60216 631 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 GOLGA8HP0CJ92 632 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 GALNT17Q6IS24 598 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 TATDN1Q6P1N9 297 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 USP17L2Q6R6M4 530 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 SH3BP5LQ7L8J4 393 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 HEATR3Q7Z4Q2 680 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 FAM83AQ86UY5 434 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 MRPS27Q92552 414 aaKnown RBP12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 ANP32BQ92688 251 aaKnown RBP12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 TSPY26PQ9H489 355 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 GRPEL1Q9HAV7 217 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 NYAP2Q9P242 653 aa12.51□□□□□ -0.41
MS4A4A-201ENST00000337908 A0A1W2PQ27 194 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms