RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 RASGRP2Q7LDG7 609 aa30.07■■■□□ 2.4
ATF4-201ENST00000337304 TRIM34Q9BYJ4 488 aa30.07■■■□□ 2.4
ATF4-201ENST00000337304 SHTN1A0MZ66 631 aa30.06■■■□□ 2.4
ATF4-201ENST00000337304 FZD9O00144 591 aa30.06■■■□□ 2.4
ATF4-201ENST00000337304 MPHOSPH10O00566 681 aaKnown RBP30.06■■■□□ 2.4
ATF4-201ENST00000337304 RTEL1Q9NZ71 1219 aa30.06■■■□□ 2.4
ATF4-201ENST00000337304 VPS54Q9P1Q0 977 aa30.06■■■□□ 2.4
ATF4-201ENST00000337304 CNTNAP1P78357 1384 aa30.06■■■□□ 2.4
ATF4-201ENST00000337304 TTLL1O95922 423 aa30.06■■■□□ 2.4
ATF4-201ENST00000337304 XBP1P17861 261 aa30.06■■■□□ 2.4
ATF4-201ENST00000337304 EIF6P56537 245 aaKnown RBP30.06■■■□□ 2.4
ATF4-201ENST00000337304 SAFBQ15424 915 aaKnown RBP eCLIP30.06■■■□□ 2.4
ATF4-201ENST00000337304 CERKLQ49MI3 558 aaPredicted RBP30.06■■■□□ 2.4
ATF4-201ENST00000337304 DIS3L2Q8IYB7 885 aaKnown RBP30.06■■■□□ 2.4
ATF4-201ENST00000337304 FAM151AQ8WW52 585 aa30.06■■■□□ 2.4
ATF4-201ENST00000337304 PGBD1Q96JS3 809 aa30.06■■■□□ 2.4
ATF4-201ENST00000337304 CSRNP1Q96S65 589 aa30.06■■■□□ 2.4
ATF4-201ENST00000337304 MYOZ2Q9NPC6 264 aa30.06■■■□□ 2.4
ATF4-201ENST00000337304 RPS12P25398 132 aaKnown RBP30.05■■■□□ 2.4
ATF4-201ENST00000337304 BTBD18B2RXH4 712 aa30.05■■■□□ 2.4
ATF4-201ENST00000337304 SLC35G1Q2M3R5 365 aa30.05■■■□□ 2.4
ATF4-201ENST00000337304 FKBP1CQ5VVH2 108 aa30.05■■■□□ 2.4
ATF4-201ENST00000337304 CLIP2Q9UDT6 1046 aa30.05■■■□□ 2.4
ATF4-201ENST00000337304 WNT10BO00744 389 aa30.04■■■□□ 2.4
ATF4-201ENST00000337304 PARP1P09874 1014 aaKnown RBP30.04■■■□□ 2.4
ATF4-201ENST00000337304 GOLGA8HP0CJ92 632 aa30.04■■■□□ 2.4
ATF4-201ENST00000337304 PFKFB3Q16875 520 aaPredicted RBP30.04■■■□□ 2.4
ATF4-201ENST00000337304 PHF20Q9BVI0 1012 aa30.04■■■□□ 2.4
ATF4-201ENST00000337304 FHDC1Q9C0D6 1143 aaPredicted RBP30.04■■■□□ 2.4
ATF4-201ENST00000337304 FOXP1Q9H334 677 aaPredicted RBP30.04■■■□□ 2.4
ATF4-201ENST00000337304 POLR3EQ9NVU0 708 aa30.04■■■□□ 2.4
ATF4-201ENST00000337304 CLIC4Q9Y696 253 aa30.04■■■□□ 2.4
ATF4-201ENST00000337304 SCG2P13521 617 aa30.03■■■□□ 2.4
ATF4-201ENST00000337304 MMP14P50281 582 aa30.03■■■□□ 2.4
ATF4-201ENST00000337304 ZNF280AP59817 542 aaPredicted RBP30.03■■■□□ 2.4
ATF4-201ENST00000337304 LRRC47Q8N1G4 583 aaKnown RBP30.03■■■□□ 2.4
ATF4-201ENST00000337304 SYAP1Q96A49 352 aaPredicted RBP30.03■■■□□ 2.4
ATF4-201ENST00000337304 LZTS2Q9BRK4 669 aa30.03■■■□□ 2.4
ATF4-201ENST00000337304 VEZTQ9HBM0 779 aa30.03■■■□□ 2.4
ATF4-201ENST00000337304 KLRF2D3W0D1 207 aa30.03■■■□□ 2.4
ATF4-201ENST00000337304 CYTH3O43739 400 aa30.03■■■□□ 2.4
ATF4-201ENST00000337304 NBPF9Q3BBW0 867 aa30.03■■■□□ 2.4
ATF4-201ENST00000337304 USP17L2Q6R6M4 530 aa30.03■■■□□ 2.4
ATF4-201ENST00000337304 NOSTRINQ8IVI9 506 aa30.03■■■□□ 2.4
ATF4-201ENST00000337304 PIBF1Q8WXW3 757 aa30.03■■■□□ 2.4
ATF4-201ENST00000337304 GOLGA6L4A6NEF3 574 aa30.02■■■□□ 2.4
ATF4-201ENST00000337304 MYO1BO43795 1136 aa30.02■■■□□ 2.4
ATF4-201ENST00000337304 SHROOM1Q2M3G4 852 aaPredicted RBP30.02■■■□□ 2.4
ATF4-201ENST00000337304 USP17L5A8MUK1 530 aa30.01■■■□□ 2.4
ATF4-201ENST00000337304 PDHBP11177 359 aa30.01■■■□□ 2.4
ATF4-201ENST00000337304 VEGFAP15692 232 aaPredicted RBP30.01■■■□□ 2.4
ATF4-201ENST00000337304 NASPP49321 788 aaPredicted RBP30.01■■■□□ 2.4
ATF4-201ENST00000337304 ZNF445P59923 1031 aa30.01■■■□□ 2.4
ATF4-201ENST00000337304 DICER1Q9UPY3 1922 aaKnown RBP30.01■■■□□ 2.39
ATF4-201ENST00000337304 PPP4R3BQ5MIZ7 849 aa30.01■■■□□ 2.39
ATF4-201ENST00000337304 LINC00301Q8NCQ3 95 aa30.01■■■□□ 2.39
ATF4-201ENST00000337304 OXER1Q8TDS5 423 aa30.01■■■□□ 2.39
ATF4-201ENST00000337304 FSD2A1L4K1 749 aa30■■■□□ 2.39
ATF4-201ENST00000337304 GMPSP49915 693 aaPredicted RBP30■■■□□ 2.39
ATF4-201ENST00000337304 FAM83AQ86UY5 434 aa30■■■□□ 2.39
ATF4-201ENST00000337304 SPZ1Q9BXG8 430 aa30■■■□□ 2.39
ATF4-201ENST00000337304 HERC5Q9UII4 1024 aaKnown RBP30■■■□□ 2.39
ATF4-201ENST00000337304 YEATS4O95619 227 aa30■■■□□ 2.39
ATF4-201ENST00000337304 SNHG28P0DPA3 235 aa30■■■□□ 2.39
ATF4-201ENST00000337304 NR5A1Q13285 461 aa30■■■□□ 2.39
ATF4-201ENST00000337304 ANO1Q5XXA6 986 aa30■■■□□ 2.39
ATF4-201ENST00000337304 DPF2Q92785 391 aa30■■■□□ 2.39
ATF4-201ENST00000337304 GJA3Q9Y6H8 435 aa30■■■□□ 2.39
ATF4-201ENST00000337304 GAS2L3Q86XJ1 694 aa29.99■■■□□ 2.39
ATF4-201ENST00000337304 CPVLQ9H3G5 476 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 KANSL2Q9H9L4 492 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.98■■■□□ 2.39
ATF4-201ENST00000337304 ZNF541Q9H0D2 1346 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 GDF11O95390 407 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 EGFRP00533 1210 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 LIG1P18858 919 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 SMARCA1P28370 1054 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 STK38Q15208 465 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 NPY5RQ15761 445 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 ABCB5Q2M3G0 1257 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 ARHGAP27Q6ZUM4 889 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 TMEM179Q6ZVK1 233 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 TMEM39BQ9GZU3 492 aa29.98■■■□□ 2.39
ATF4-201ENST00000337304 GOLGA6L3A6NEY3 463 aa29.97■■■□□ 2.39
ATF4-201ENST00000337304 SBF1O95248 1867 aa29.97■■■□□ 2.39
ATF4-201ENST00000337304 KRT2P35908 639 aa29.97■■■□□ 2.39
ATF4-201ENST00000337304 ATP2B2Q01814 1243 aa29.97■■■□□ 2.39
ATF4-201ENST00000337304 RRP1BQ14684 758 aaKnown RBP29.97■■■□□ 2.39
ATF4-201ENST00000337304 CCDC183Q5T5S1 534 aa29.97■■■□□ 2.39
ATF4-201ENST00000337304 MICALL2Q8IY33 904 aa29.97■■■□□ 2.39
ATF4-201ENST00000337304 NYAP2Q9P242 653 aa29.97■■■□□ 2.39
ATF4-201ENST00000337304 SEPT2Q15019 361 aa29.96■■■□□ 2.39
ATF4-201ENST00000337304 ASPRV1Q53RT3 343 aa29.96■■■□□ 2.39
ATF4-201ENST00000337304 MKL1Q969V6 931 aa29.96■■■□□ 2.39
ATF4-201ENST00000337304 SYCE3A1L190 88 aa29.96■■■□□ 2.39
ATF4-201ENST00000337304 EEF2P13639 858 aaKnown RBP29.96■■■□□ 2.39
ATF4-201ENST00000337304 SF3A1Q15459 793 aaKnown RBP29.96■■■□□ 2.39
ATF4-201ENST00000337304 RBM26Q5T8P6 1007 aaKnown RBP29.96■■■□□ 2.39
ATF4-201ENST00000337304 CDAN1Q8IWY9 1227 aa29.96■■■□□ 2.39
ATF4-201ENST00000337304 BICD2Q8TD16 824 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms