RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 DPEP1P16444 411 aa10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 CCT6AP40227 531 aaKnown RBP10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 RSBN1LQ6PCB5 846 aaPredicted RBP10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 JAK2O60674 1132 aa10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 SLFN12Q8IYM2 578 aa10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 RFX5P48382 616 aaPredicted RBP10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 MYO6Q9UM54 1294 aa10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 RABGAP1Q9Y3P9 1069 aa10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 LIG1P18858 919 aa10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 TBC1D10BQ4KMP7 808 aaPredicted RBP10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 C2orf69Q8N8R5 385 aa10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 TDRD3Q9H7E2 651 aaKnown RBP10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 KDM3AQ9Y4C1 1321 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 HHIPL2Q6UWX4 724 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 HS2ST1Q7LGA3 356 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 NSUN4Q96CB9 384 aaKnown RBP10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 KCNG1Q9UIX4 513 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 NEMFO60524 1076 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 UVSSAQ2YD98 709 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 DCP1AQ9NPI6 582 aaPredicted RBP10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 RCAN1P53805 252 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 NOSTRINQ8IVI9 506 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 PAGR1Q9BTK6 254 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 VPS33BQ9H267 617 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 SPC25Q9HBM1 224 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 SERPINA10Q9UK55 444 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 ALAS1P13196 640 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 ADD1P35611 737 aaKnown RBP10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 FAM160A1Q05DH4 1040 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 KIF4BQ2VIQ3 1234 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 ADCK5Q3MIX3 580 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 DCAF4Q8WV16 495 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 SLC10A4Q96EP9 437 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 PCDHA1Q9Y5I3 950 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 SRGNP10124 158 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 SFPQP23246 707 aaKnown RBP eCLIP10.51□□□□□ -0.736e-7■■□□□ 11.4
FNDC3B-201ENST00000336824 SCRN1Q12765 414 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 SEPT11Q9NVA2 429 aaKnown RBP10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 KRT13P13646 458 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 HDLBPQ00341 1268 aaKnown RBP10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 TCERG1LQ5VWI1 586 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 RASEFQ8IZ41 740 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 CAGE1Q8TC20 777 aa10.51□□□□□ -0.73
FNDC3B-201ENST00000336824 GDF11O95390 407 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 SMTNP53814 917 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 ZSCAN23Q3MJ62 389 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 ANKRD35Q8N283 1001 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 LMNB1P20700 586 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 NT5C3AQ9H0P0 336 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 AZI2Q9H6S1 392 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 YEATS4O95619 227 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 CCDC172P0C7W6 258 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 LRSAM1Q6UWE0 723 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 MNS1Q8NEH6 495 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 KCNJ14Q9UNX9 436 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 NWD2Q9ULI1 1742 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 SLIT2O94813 1529 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 POLRMTO00411 1230 aaKnown RBP10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 GSDMDP57764 484 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 CDC37L1Q7L3B6 337 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 FILIP1Q7Z7B0 1213 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 AGBL3Q8NEM8 1001 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 TDRD7Q8NHU6 1098 aaKnown RBP10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 FOXP1Q9H334 677 aaPredicted RBP10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 ADD3Q9UEY8 706 aaKnown RBP10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 ZBTB21Q9ULJ3 1066 aa10.5□□□□□ -0.73
FNDC3B-201ENST00000336824 NEK8Q86SG6 692 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 TXKP42681 527 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 TRAPPC10P48553 1259 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 SYDE2Q5VT97 1194 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 CNNM4Q6P4Q7 775 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 DYNLL2Q96FJ2 89 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 LAD1O00515 517 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 SPA17Q15506 151 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 MIGA2Q7L4E1 593 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 KIAA1328Q86T90 577 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 GAS7O60861 476 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 IFT74Q96LB3 600 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 KCNH3Q9ULD8 1083 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 DNM3Q9UQ16 869 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 CD2APQ9Y5K6 639 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 GPS2Q13227 327 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 CNOT7Q9UIV1 285 aaKnown RBP10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 hCG_1642624A0A1W2PR95 340 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 SCARF1Q14162 830 aa10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 NUP88Q99567 741 aaPredicted RBP10.49□□□□□ -0.73
FNDC3B-201ENST00000336824 ARHGEF35A5YM69 484 aa10.48□□□□□ -0.73
FNDC3B-201ENST00000336824 GOLGA8HP0CJ92 632 aa10.48□□□□□ -0.73
FNDC3B-201ENST00000336824 IBSPP21815 317 aaPredicted RBP10.48□□□□□ -0.73
FNDC3B-201ENST00000336824 RPL13P26373 211 aaKnown RBP10.48□□□□□ -0.73
FNDC3B-201ENST00000336824 SP4Q02446 784 aa10.48□□□□□ -0.73
FNDC3B-201ENST00000336824 KCTD1Q719H9 257 aa10.48□□□□□ -0.73
FNDC3B-201ENST00000336824 CDAN1Q8IWY9 1227 aa10.48□□□□□ -0.73
FNDC3B-201ENST00000336824 IFNAR1P17181 557 aa10.48□□□□□ -0.73
FNDC3B-201ENST00000336824 OTUD6AQ7L8S5 288 aa10.48□□□□□ -0.73
FNDC3B-201ENST00000336824 NCAPG2Q86XI2 1143 aa10.48□□□□□ -0.73
FNDC3B-201ENST00000336824 SPICE1Q8N0Z3 855 aa10.48□□□□□ -0.73
FNDC3B-201ENST00000336824 LRWD1Q9UFC0 647 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms