RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 FAM205AQ6ZU69 1335 aa16.9■□□□□ 0.3
UBA1-201ENST00000335972 BAG1Q99933 345 aaPredicted RBP16.9■□□□□ 0.3
UBA1-201ENST00000335972 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
UBA1-201ENST00000335972 TYW1BQ6NUM6 668 aa16.9■□□□□ 0.3
UBA1-201ENST00000335972 MLKLQ8NB16 471 aa16.9■□□□□ 0.3
UBA1-201ENST00000335972 BRMS1Q9HCU9 246 aa16.9■□□□□ 0.3
UBA1-201ENST00000335972 TIAM2Q8IVF5 1701 aa16.9■□□□□ 0.3
UBA1-201ENST00000335972 SCG2P13521 617 aa16.89■□□□□ 0.3
UBA1-201ENST00000335972 RCSD1Q6JBY9 416 aa16.89■□□□□ 0.3
UBA1-201ENST00000335972 NID2Q14112 1375 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 TPTE2Q6XPS3 522 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 TMEM139Q8IV31 216 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 REXO1L1PQ8IX06 675 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 TC2NQ8N9U0 490 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 MKNK2Q9HBH9 465 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 IL17RBQ9NRM6 502 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 NARFQ9UHQ1 456 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 PPP2R2CQ9Y2T4 447 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 PSDA5PKW4 1024 aaPredicted RBP16.89■□□□□ 0.29
UBA1-201ENST00000335972 ZNF18P17022 549 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 PLCD1P51178 756 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 CUL4BQ13620 913 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 WDR24Q96S15 920 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 PLCH1Q4KWH8 1693 aa16.89■□□□□ 0.29
UBA1-201ENST00000335972 SOWAHDA6NJG2 315 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 SLFN14P0C7P3 912 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 SPECC1LQ69YQ0 1117 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 ENOX1Q8TC92 643 aaKnown RBP16.88■□□□□ 0.29
UBA1-201ENST00000335972 KAT14Q9H8E8 782 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 GNG11P61952 73 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 ETF1P62495 437 aaKnown RBP16.88■□□□□ 0.29
UBA1-201ENST00000335972 TRIM65Q6PJ69 517 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 ZNF579Q8NAF0 562 aaKnown RBP16.88■□□□□ 0.29
UBA1-201ENST00000335972 RASSF8Q8NHQ8 419 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 TNFRSF25Q93038 417 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 VAT1LQ9HCJ6 419 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 RBM28Q9NW13 759 aaKnown RBP16.88■□□□□ 0.29
UBA1-201ENST00000335972 DUOX1Q9NRD9 1551 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 SYNRGQ9UMZ2 1314 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 RRAGBQ5VZM2 374 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 MTRQ99707 1265 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 ZSWIM4Q9H7M6 989 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 ST7Q9NRC1 585 aa16.88■□□□□ 0.29
UBA1-201ENST00000335972 XDHP47989 1333 aa16.87■□□□□ 0.29
UBA1-201ENST00000335972 HEATR3Q7Z4Q2 680 aa16.87■□□□□ 0.29
UBA1-201ENST00000335972 PNMA1Q8ND90 353 aa16.87■□□□□ 0.29
UBA1-201ENST00000335972 ERO1AQ96HE7 468 aa16.87■□□□□ 0.29
UBA1-201ENST00000335972 CARD6Q9BX69 1037 aa16.87■□□□□ 0.29
UBA1-201ENST00000335972 LZTFL1Q9NQ48 299 aa16.87■□□□□ 0.29
UBA1-201ENST00000335972 RTCBQ9Y3I0 505 aaKnown RBP16.87■□□□□ 0.29
UBA1-201ENST00000335972 TM4SF1P30408 202 aa16.87■□□□□ 0.29
UBA1-201ENST00000335972 SLC35G1Q2M3R5 365 aa16.87■□□□□ 0.29
UBA1-201ENST00000335972 NT5DC1Q5TFE4 455 aa16.87■□□□□ 0.29
UBA1-201ENST00000335972 BARGINQ6ZT62 677 aa16.87■□□□□ 0.29
UBA1-201ENST00000335972 VPS16Q9H269 839 aa16.87■□□□□ 0.29
UBA1-201ENST00000335972 CGNQ9P2M7 1197 aaKnown RBP16.87■□□□□ 0.29
UBA1-201ENST00000335972 GDAQ9Y2T3 454 aa16.87■□□□□ 0.29
UBA1-201ENST00000335972 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.87■□□□□ 0.294e-7■■□□□ 13.6
UBA1-201ENST00000335972 LDHBP07195 334 aaKnown RBP16.86■□□□□ 0.29
UBA1-201ENST00000335972 RBL2Q08999 1139 aa16.86■□□□□ 0.29
UBA1-201ENST00000335972 DDAH1O94760 285 aa16.86■□□□□ 0.29
UBA1-201ENST00000335972 SLC10A5Q5PT55 438 aa16.86■□□□□ 0.29
UBA1-201ENST00000335972 DACH1Q9UI36 760 aa16.86■□□□□ 0.29
UBA1-201ENST00000335972 RPS6KA4O75676 772 aa16.86■□□□□ 0.29
UBA1-201ENST00000335972 INF2Q27J81 1249 aa16.86■□□□□ 0.29
UBA1-201ENST00000335972 IGSF22Q8N9C0 903 aa16.86■□□□□ 0.29
UBA1-201ENST00000335972 PPP1R3GB7ZBB8 358 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 PES1O00541 588 aaKnown RBP16.85■□□□□ 0.29
UBA1-201ENST00000335972 CALM1P0DP23 149 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 CALM2P0DP24 149 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 CALM3P0DP25 149 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 ZSCAN20P17040 1043 aaPredicted RBP16.85■□□□□ 0.29
UBA1-201ENST00000335972 RFC4P35249 363 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 TBX2Q13207 712 aaPredicted RBP16.85■□□□□ 0.29
UBA1-201ENST00000335972 DHX8Q14562 1220 aaKnown RBP16.85■□□□□ 0.29
UBA1-201ENST00000335972 ARHGAP29Q52LW3 1261 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 NYXQ9GZU5 481 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 TSPY3P0CV98 308 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 TSPY8P0CW00 308 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 KANK3Q6NY19 840 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 RGS22Q8NE09 1264 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 MTA3Q9BTC8 594 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 TMEM60Q9H2L4 133 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 MRPL44Q9H9J2 332 aaKnown RBP16.85■□□□□ 0.29
UBA1-201ENST00000335972 ATP8A2Q9NTI2 1148 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 TAB2Q9NYJ8 693 aa16.85■□□□□ 0.29
UBA1-201ENST00000335972 ORC4O43929 436 aa16.84■□□□□ 0.29
UBA1-201ENST00000335972 ATP2C1P98194 919 aaPredicted RBP16.84■□□□□ 0.29
UBA1-201ENST00000335972 NR1I3Q14994 352 aa16.84■□□□□ 0.29
UBA1-201ENST00000335972 PFKFB3Q16875 520 aaPredicted RBP16.84■□□□□ 0.29
UBA1-201ENST00000335972 ANKRD2Q9GZV1 360 aa16.84■□□□□ 0.29
UBA1-201ENST00000335972 TRIM49BA6NDI0 452 aa16.84■□□□□ 0.29
UBA1-201ENST00000335972 TFRCP02786 760 aaKnown RBP16.84■□□□□ 0.29
UBA1-201ENST00000335972 FGRP09769 529 aa16.84■□□□□ 0.29
UBA1-201ENST00000335972 RCAN1P53805 252 aa16.84■□□□□ 0.29
UBA1-201ENST00000335972 FAM196AQ6ZSG2 479 aa16.84■□□□□ 0.29
UBA1-201ENST00000335972 MNS1Q8NEH6 495 aa16.84■□□□□ 0.29
UBA1-201ENST00000335972 SPATA20Q8TB22 786 aa16.84■□□□□ 0.29
UBA1-201ENST00000335972 UIMC1Q96RL1 719 aa16.84■□□□□ 0.29
UBA1-201ENST00000335972 ARPP21Q9UBL0 812 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms