RNA–Protein interactions for RNA: ENST00000335762.9

CACNA1C-202, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 6,968 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-202ENST00000335762 TMED1Q13445 227 aa11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 HADHQ16836 314 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 TSC1Q92574 1164 aa11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 TRIM56Q9BRZ2 755 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 EFHD1Q9BUP0 239 aa11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 SCOCQ9UIL1 159 aa11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 EFCAB8A8MWE9 144 aa11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 KIF11P52732 1056 aa11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 ADKP55263 362 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 KRT81Q14533 505 aa11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 XPO4Q9C0E2 1151 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 KRT82Q9NSB4 513 aa11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 ZBTB24O43167 697 aaPredicted RBP11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 TRPA1O75762 1119 aa11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 TFCP2Q12800 502 aa11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 TRMT44Q8IYL2 757 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 ZNF710Q8N1W2 664 aa11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 MRPL50Q8N5N7 158 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 CHMP6Q96FZ7 201 aa11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 MRPL44Q9H9J2 332 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-202ENST00000335762 TNNI1P19237 187 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 CASP2P42575 452 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 IFT88Q13099 833 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 KRT25Q7Z3Z0 450 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 DCLK2Q8N568 766 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 TCP11Q8WWU5 503 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 INTS9Q9NV88 658 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 SAT1P21673 171 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 IL9RQ01113 521 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 RCN2Q14257 317 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 BBOF1Q8ND07 529 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 P4HA1P13674 534 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 EEF1DP29692 281 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 GARSP41250 739 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 STX1BP61266 288 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 PPP2R5AQ15172 486 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 SCYL2Q6P3W7 929 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 PLEKHM2Q8IWE5 1019 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 CDKL2Q92772 493 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 ZBBXA8MT70 800 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 EEF1GP26641 437 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 PDZD4Q76G19 769 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 IFT122Q9HBG6 1241 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 ANLNQ9NQW6 1124 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 ZNF215Q9UL58 517 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 ANGEL1Q9UNK9 670 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 LRMPQ12912 555 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 KMT5BQ4FZB7 885 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 OTUD7BQ6GQQ9 843 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 KRT80Q6KB66 452 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 NSD2O96028 1365 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 IFNAR2P48551 515 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 ETF1P62495 437 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 CEP85Q6P2H3 762 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 TPTE2Q6XPS3 522 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 MCUQ8NE86 351 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 FGD4Q96M96 766 aa11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 BIN2Q9UBW5 565 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-202ENST00000335762 GNA14O95837 355 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 EEF1B2P24534 225 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 ATP6V1E1P36543 226 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 DNM2P50570 870 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 TEX11Q8IYF3 940 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 JDP2Q8WYK2 163 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 TEKT1Q969V4 418 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 PCDHB13Q9Y5F0 798 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 PDE1BQ01064 536 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 NBPF14Q5TI25 921 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 ANKRD2Q9GZV1 360 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 HAUS4Q9H6D7 363 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 AZI2Q9H6S1 392 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 NCOA5Q9HCD5 579 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 KDM2BQ8NHM5 1336 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 GAPVD1Q14C86 1478 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 MYCLP12524 364 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 ATF7P17544 494 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 TMTC3Q6ZXV5 915 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 SKIP12755 728 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 ATF2P15336 505 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 SLC39A6Q13433 755 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 CABP7Q86V35 215 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 RDH13Q8NBN7 331 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 STAMQ92783 540 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 KLHL29Q96CT2 875 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 LSM14BQ9BX40 385 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 NYXQ9GZU5 481 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 KCNG1Q9UIX4 513 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 C8orf58Q8NAV2 365 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 SCHIP1Q9P0W5 487 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 MAD1L1Q9Y6D9 718 aa11.5□□□□□ -0.57
CACNA1C-202ENST00000335762 PSDA5PKW4 1024 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-202ENST00000335762 YARSP54577 528 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-202ENST00000335762 RUNDC3BQ96NL0 473 aa11.49□□□□□ -0.57
CACNA1C-202ENST00000335762 EYA3Q99504 573 aa11.49□□□□□ -0.57
CACNA1C-202ENST00000335762 IRS4O14654 1257 aaPredicted RBP11.49□□□□□ -0.57
CACNA1C-202ENST00000335762 CEP19Q96LK0 163 aa11.49□□□□□ -0.57
CACNA1C-202ENST00000335762 SOS1Q07889 1333 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms