RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 MYH1P12882 1939 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 MYH2Q9UKX2 1941 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 MYH4Q9Y623 1939 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 EEF1B2P24534 225 aaKnown RBP11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 HP1BP3Q5SSJ5 553 aaPredicted RBP11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 ANKRD35Q8N283 1001 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 PAWRQ96IZ0 340 aaKnown RBP11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 YY1P25490 414 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 ATP1A2P50993 1020 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 PPP4R4Q6NUP7 873 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 CEP70Q8NHQ1 597 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 ASIC3Q9UHC3 531 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 SLC5A1P13866 664 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 CATSPER1Q8NEC5 780 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 UHRF1BP1Q6BDS2 1440 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 AOX1Q06278 1338 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 SLC4A1P02730 911 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 YIPF3Q9GZM5 350 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 CC2D2AQ9P2K1 1620 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 KDM5DQ9BY66 1539 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 MAPKBP1O60336 1514 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 ESYT2A0FGR8 921 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 SLC9C1Q4G0N8 1177 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 ZCRB1Q8TBF4 217 aaKnown RBP11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 DHX58Q96C10 678 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 OSBPL1AQ9BXW6 950 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 PPP2R2CQ9Y2T4 447 aa11.34□□□□□ -0.59
SPTBN1-201ENST00000333896 NR1D1P20393 614 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 SLC12A2P55011 1212 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 HAND2P61296 217 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 CWF19L2Q2TBE0 894 aaKnown RBP11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 HS2ST1Q7LGA3 356 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 CCDC138Q96M89 665 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 TRIM37O94972 964 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 APOBRQ0VD83 1088 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 ANGPT1Q15389 498 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 ARHGEF18Q6ZSZ5 1173 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 IFIH1Q9BYX4 1025 aaKnown RBP11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 SNUPNO95149 360 aaKnown RBP11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 KRT2P35908 639 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 NFE2L2Q16236 605 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 UBE3BQ7Z3V4 1068 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 HOOK2Q96ED9 719 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 HAUS4Q9H6D7 363 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 CUL1Q13616 776 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 KSR1Q8IVT5 923 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 CFAP61Q8NHU2 1237 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 RBM6P78332 1123 aaKnown RBP11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 RSBN1LQ6PCB5 846 aaPredicted RBP11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 SEPT3Q9UH03 358 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 PPWD1Q96BP3 646 aaKnown RBP11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 INTS9Q9NV88 658 aaKnown RBP11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 GSTA1P08263 222 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 PSMA4P25789 261 aaKnown RBP11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 STX17P56962 302 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 IFIT1BQ5T764 474 aaKnown RBP11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 MYSM1Q5VVJ2 828 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 IQUBQ8NA54 791 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 NCOA7Q8NI08 942 aa11.33□□□□□ -0.6
SPTBN1-201ENST00000333896 HSPA8P11142 646 aaKnown RBP11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 PMS1P54277 932 aaKnown RBP11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 ABCA5Q8WWZ7 1642 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 CASP8Q14790 479 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 USP26Q9BXU7 913 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 TRPA1O75762 1119 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 ANKRD42Q8N9B4 389 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 RPGRQ92834 1020 aaKnown RBP11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 ARHGEF12Q9NZN5 1544 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 MAPK13O15264 365 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 ALDH1L1O75891 902 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 TOM1L2Q6ZVM7 507 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 GRK7Q8WTQ7 553 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 ATP6V0A1Q93050 837 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 SERPINI1Q99574 410 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 POLR3CQ9BUI4 534 aaPredicted RBP11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 HYOU1Q9Y4L1 999 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 SCYL3Q8IZE3 742 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 CNGB3Q9NQW8 809 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 FGD5Q6ZNL6 1462 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 TTC4O95801 387 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 SNX29Q8TEQ0 813 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 CCDC8Q9H0W5 538 aaPredicted RBP11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 ECHDC1Q9NTX5 307 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 AQRO60306 1485 aaKnown RBP eCLIP11.32□□□□□ -0.62e-7■■■■□ 19.7
SPTBN1-201ENST00000333896 FAM133BQ5BKY9 247 aaKnown RBP11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 CTNND2Q9UQB3 1225 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 ZNF652Q9Y2D9 606 aa11.32□□□□□ -0.6
SPTBN1-201ENST00000333896 GNGT2O14610 69 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 PLS1Q14651 629 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 KIAA2013Q8IYS2 634 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 CNNM2Q9H8M5 875 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 HAUS2Q9NVX0 235 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 SART1O43290 800 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 HDAC4P56524 1084 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 STRN3Q13033 797 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 GLE1Q53GS7 698 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 SKAP1Q86WV1 359 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 ALG1Q9BT22 464 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 TMEM63CQ9P1W3 806 aa11.31□□□□□ -0.6
SPTBN1-201ENST00000333896 TEKT2Q9UIF3 430 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms