RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 ZKSCAN3Q9BRR0 538 aa10.12□□□□□ -0.79
LSAMP-201ENST00000333617 ALG1Q9BT22 464 aa10.12□□□□□ -0.79
LSAMP-201ENST00000333617 NUP62CLQ9H1M0 184 aa10.12□□□□□ -0.79
LSAMP-201ENST00000333617 ATP8A2Q9NTI2 1148 aa10.12□□□□□ -0.79
LSAMP-201ENST00000333617 STK36Q9NRP7 1315 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 UFL1O94874 794 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 HOXA10P31260 410 aaPredicted RBP10.11□□□□□ -0.79
LSAMP-201ENST00000333617 RCAN1P53805 252 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 USP46P62068 366 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 GSTO1P78417 241 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 NTRK3Q16288 839 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 MAP3K11Q16584 847 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 RTN1Q16799 776 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 CTR9Q6PD62 1173 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 SLC51AQ86UW1 340 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 FAM160A2Q8N612 972 aaPredicted RBP10.11□□□□□ -0.79
LSAMP-201ENST00000333617 PHKBQ93100 1093 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 CRAMP1Q96RY5 1269 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 MYL10Q9BUA6 226 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 FAM217BQ9NTX9 383 aaPredicted RBP10.11□□□□□ -0.79
LSAMP-201ENST00000333617 DDX19AQ9NUU7 478 aaKnown RBP10.11□□□□□ -0.79
LSAMP-201ENST00000333617 DACT1Q9NYF0 836 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 GGA1Q9UJY5 639 aa10.11□□□□□ -0.79
LSAMP-201ENST00000333617 TNKSO95271 1327 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 CYP2D7A0A087X1C5 515 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 CCDC196A0A1B0GTZ2 297 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 USP17L12C9JPN9 530 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 USP17L21D6R901 530 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 PLSCR1O15162 318 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 SLC3A2P08195 630 aaKnown RBP10.1□□□□□ -0.79
LSAMP-201ENST00000333617 FGRP09769 529 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 KIF23Q02241 960 aaPredicted RBP10.1□□□□□ -0.79
LSAMP-201ENST00000333617 SSRP1Q08945 709 aaKnown RBP10.1□□□□□ -0.79
LSAMP-201ENST00000333617 TRIM29Q14134 588 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 UVSSAQ2YD98 709 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 WASF1Q92558 559 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 GPR101Q96P66 508 aaPredicted RBP10.1□□□□□ -0.79
LSAMP-201ENST00000333617 FUCA2Q9BTY2 467 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 FTOQ9C0B1 505 aaKnown RBP eCLIP10.1□□□□□ -0.79
LSAMP-201ENST00000333617 DCP1AQ9NPI6 582 aaPredicted RBP10.1□□□□□ -0.79
LSAMP-201ENST00000333617 GJB4Q9NTQ9 266 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 RTEL1Q9NZ71 1219 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 ARPP21Q9UBL0 812 aaPredicted RBP10.1□□□□□ -0.79
LSAMP-201ENST00000333617 QSER1Q2KHR3 1735 aa10.1□□□□□ -0.79
LSAMP-201ENST00000333617 DDX60LQ5H9U9 1706 aaKnown RBP10.1□□□□□ -0.79
LSAMP-201ENST00000333617 KLRG2A4D1S0 409 aaPredicted RBP10.09□□□□□ -0.79
LSAMP-201ENST00000333617 ORC4O43929 436 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 RANBP6O60518 1105 aaKnown RBP10.09□□□□□ -0.79
LSAMP-201ENST00000333617 APBA3O96018 575 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 CCDC192P0DO97 292 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 IFNAR1P17181 557 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 PPP2R5BQ15173 497 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 SEC23AQ15436 765 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 SBK1Q52WX2 424 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 PLA2G2CQ5R387 149 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 ZNF697Q5TEC3 545 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 MYSM1Q5VVJ2 828 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 TMC4Q7Z404 712 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 IQCA1Q86XH1 822 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 TRIM22Q8IYM9 498 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 ZNF654Q8IZM8 581 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 NLGN1Q8N2Q7 840 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 ZSCAN10Q96SZ4 725 aaPredicted RBP10.09□□□□□ -0.79
LSAMP-201ENST00000333617 SLC26A6Q9BXS9 759 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 TNMDQ9H2S6 317 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 CLSTN2Q9H4D0 955 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 PODXL2Q9NZ53 605 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 SMIM22K7EJ46 135 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 BAG3O95817 575 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 POLR3DP05423 398 aaPredicted RBP10.09□□□□□ -0.79
LSAMP-201ENST00000333617 LDHCP07864 332 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 IL1R1P14778 569 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 ME1P48163 572 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 GNL2Q13823 731 aaKnown RBP10.09□□□□□ -0.79
LSAMP-201ENST00000333617 STK38Q15208 465 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 CAMK4Q16566 473 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 ZNF827Q17R98 1081 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 MSS51Q4VC12 460 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 IFIT1BQ5T764 474 aaKnown RBP10.09□□□□□ -0.79
LSAMP-201ENST00000333617 KRT40Q6A162 431 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 CCDC73Q6ZRK6 1079 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 CCAR1Q8IX12 1150 aaKnown RBP10.09□□□□□ -0.79
LSAMP-201ENST00000333617 ENAHQ8N8S7 591 aaPredicted RBP10.09□□□□□ -0.79
LSAMP-201ENST00000333617 FANCBQ8NB91 859 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 FLAD1Q8NFF5 587 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 TBC1D16Q8TBP0 767 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 KCNG4Q8TDN1 519 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 NUP133Q8WUM0 1156 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 PDLIM2Q96JY6 352 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 AIFM3Q96NN9 605 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 NOL10Q9BSC4 688 aaKnown RBP10.09□□□□□ -0.79
LSAMP-201ENST00000333617 CD209Q9NNX6 404 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 POLR3EQ9NVU0 708 aa10.09□□□□□ -0.79
LSAMP-201ENST00000333617 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.09□□□□□ -0.79
LSAMP-201ENST00000333617 KIF28PB7ZC32 967 aa10.08□□□□□ -0.8
LSAMP-201ENST00000333617 PRDM1O75626 825 aa10.08□□□□□ -0.8
LSAMP-201ENST00000333617 YEATS4O95619 227 aa10.08□□□□□ -0.8
LSAMP-201ENST00000333617 USP5P45974 858 aa10.08□□□□□ -0.8
LSAMP-201ENST00000333617 PDE4BQ07343 736 aa10.08□□□□□ -0.8
LSAMP-201ENST00000333617 SF3A1Q15459 793 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms