RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 ZNF280AP59817 542 aaPredicted RBP23.24■■□□□ 1.31
SUMO3-201ENST00000332859 METTL16Q86W50 562 aaKnown RBP23.24■■□□□ 1.31
SUMO3-201ENST00000332859 GJB4Q9NTQ9 266 aa23.24■■□□□ 1.31
SUMO3-201ENST00000332859 CNTNAP5Q8WYK1 1306 aa23.24■■□□□ 1.31
SUMO3-201ENST00000332859 GUCY1A2P33402 732 aa23.24■■□□□ 1.31
SUMO3-201ENST00000332859 HS1BP3Q53T59 392 aa23.24■■□□□ 1.31
SUMO3-201ENST00000332859 ARHGAP27Q6ZUM4 889 aa23.24■■□□□ 1.31
SUMO3-201ENST00000332859 BRAPQ7Z569 592 aa23.24■■□□□ 1.31
SUMO3-201ENST00000332859 RRAGDQ9NQL2 400 aaPredicted RBP23.24■■□□□ 1.31
SUMO3-201ENST00000332859 TFIP11Q9UBB9 837 aaKnown RBP23.24■■□□□ 1.31
SUMO3-201ENST00000332859 KIF23Q02241 960 aaPredicted RBP23.23■■□□□ 1.31
SUMO3-201ENST00000332859 SRBD1Q8N5C6 995 aaKnown RBP23.23■■□□□ 1.31
SUMO3-201ENST00000332859 DPF2Q92785 391 aa23.23■■□□□ 1.31
SUMO3-201ENST00000332859 ZNF396Q96N95 335 aaPredicted RBP23.23■■□□□ 1.31
SUMO3-201ENST00000332859 CSRNP1Q96S65 589 aa23.23■■□□□ 1.31
SUMO3-201ENST00000332859 VEZTQ9HBM0 779 aa23.23■■□□□ 1.31
SUMO3-201ENST00000332859 GREB1LQ9C091 1923 aaPredicted RBP23.22■■□□□ 1.31
SUMO3-201ENST00000332859 UBE2Q2LH0YL09 131 aa23.22■■□□□ 1.31
SUMO3-201ENST00000332859 MPHOSPH10O00566 681 aaKnown RBP23.22■■□□□ 1.31
SUMO3-201ENST00000332859 CERKLQ49MI3 558 aaPredicted RBP23.22■■□□□ 1.31
SUMO3-201ENST00000332859 TATDN1Q6P1N9 297 aa23.22■■□□□ 1.31
SUMO3-201ENST00000332859 GJA3Q9Y6H8 435 aa23.22■■□□□ 1.31
SUMO3-201ENST00000332859 WNT10BO00744 389 aa23.22■■□□□ 1.31
SUMO3-201ENST00000332859 TTLL1O95922 423 aa23.22■■□□□ 1.31
SUMO3-201ENST00000332859 XBP1P17861 261 aa23.22■■□□□ 1.31
SUMO3-201ENST00000332859 GMPSP49915 693 aaPredicted RBP23.22■■□□□ 1.31
SUMO3-201ENST00000332859 FAM83AQ86UY5 434 aa23.22■■□□□ 1.31
SUMO3-201ENST00000332859 LZTS2Q9BRK4 669 aa23.22■■□□□ 1.31
SUMO3-201ENST00000332859 MAD2L2Q9UI95 211 aa23.22■■□□□ 1.31
SUMO3-201ENST00000332859 V9GY48 417 aaPredicted RBP23.22■■□□□ 1.31
SUMO3-201ENST00000332859 CNTNAP1P78357 1384 aa23.21■■□□□ 1.31
SUMO3-201ENST00000332859 ESPNB1AK53 854 aa23.21■■□□□ 1.31
SUMO3-201ENST00000332859 LMNB1P20700 586 aa23.21■■□□□ 1.31
SUMO3-201ENST00000332859 FUCA2Q9BTY2 467 aa23.21■■□□□ 1.31
SUMO3-201ENST00000332859 DDX19AQ9NUU7 478 aaKnown RBP23.21■■□□□ 1.31
SUMO3-201ENST00000332859 HERC5Q9UII4 1024 aaKnown RBP23.21■■□□□ 1.31
SUMO3-201ENST00000332859 FAM196BA6NMK8 535 aa23.2■■□□□ 1.3
SUMO3-201ENST00000332859 SAFBQ15424 915 aaKnown RBP eCLIP23.2■■□□□ 1.3
SUMO3-201ENST00000332859 PKN1Q16512 942 aa23.2■■□□□ 1.3
SUMO3-201ENST00000332859 RNF214Q8ND24 703 aa23.2■■□□□ 1.3
SUMO3-201ENST00000332859 MYH6P13533 1939 aa23.2■■□□□ 1.3
SUMO3-201ENST00000332859 SHTN1A0MZ66 631 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 PALM3A6NDB9 673 aaPredicted RBP23.19■■□□□ 1.3
SUMO3-201ENST00000332859 SLURP2P0DP57 97 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 GNL2Q13823 731 aaKnown RBP23.19■■□□□ 1.3
SUMO3-201ENST00000332859 TPRNQ4KMQ1 711 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 NUP62CLQ9H1M0 184 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 ZNF541Q9H0D2 1346 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 MMP1P03956 469 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 PARP1P09874 1014 aaKnown RBP23.19■■□□□ 1.3
SUMO3-201ENST00000332859 NBPF9Q3BBW0 867 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 MICALL2Q8IY33 904 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 STAG2Q8N3U4 1231 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 SYT17Q9BSW7 474 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 CLIP2Q9UDT6 1046 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 RCOR1Q9UKL0 485 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 MTMR7Q9Y216 660 aa23.19■■□□□ 1.3
SUMO3-201ENST00000332859 KIF28PB7ZC32 967 aa23.18■■□□□ 1.3
SUMO3-201ENST00000332859 LIG1P18858 919 aa23.18■■□□□ 1.3
SUMO3-201ENST00000332859 CLCN1P35523 988 aa23.18■■□□□ 1.3
SUMO3-201ENST00000332859 TNNI2P48788 182 aa23.18■■□□□ 1.3
SUMO3-201ENST00000332859 ILDR2Q71H61 639 aa23.18■■□□□ 1.3
SUMO3-201ENST00000332859 TMEM179Q6ZVK1 233 aa23.17■■□□□ 1.3
SUMO3-201ENST00000332859 PGBD1Q96JS3 809 aa23.17■■□□□ 1.3
SUMO3-201ENST00000332859 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.17■■□□□ 1.33e-6■■■■■ 29.3
SUMO3-201ENST00000332859 CNOT7Q9UIV1 285 aaKnown RBP23.17■■□□□ 1.3
SUMO3-201ENST00000332859 DICER1Q9UPY3 1922 aaKnown RBP23.17■■□□□ 1.3
SUMO3-201ENST00000332859 U2AF2P26368 475 aaKnown RBP eCLIP23.17■■□□□ 1.3
SUMO3-201ENST00000332859 MAP3K11Q16584 847 aa23.17■■□□□ 1.3
SUMO3-201ENST00000332859 ABCB5Q2M3G0 1257 aa23.17■■□□□ 1.3
SUMO3-201ENST00000332859 MYSM1Q5VVJ2 828 aa23.17■■□□□ 1.3
SUMO3-201ENST00000332859 CLEC10AQ8IUN9 316 aa23.17■■□□□ 1.3
SUMO3-201ENST00000332859 LRRC47Q8N1G4 583 aaKnown RBP23.17■■□□□ 1.3
SUMO3-201ENST00000332859 KANSL2Q9H9L4 492 aa23.17■■□□□ 1.3
SUMO3-201ENST00000332859 hCG_1642624A0A1W2PR95 340 aa23.16■■□□□ 1.3
SUMO3-201ENST00000332859 CCDC192P0DO97 292 aa23.16■■□□□ 1.3
SUMO3-201ENST00000332859 SCG2P13521 617 aa23.16■■□□□ 1.3
SUMO3-201ENST00000332859 PFKFB3Q16875 520 aaPredicted RBP23.16■■□□□ 1.3
SUMO3-201ENST00000332859 RBM26Q5T8P6 1007 aaKnown RBP23.16■■□□□ 1.3
SUMO3-201ENST00000332859 USP28Q96RU2 1077 aa23.16■■□□□ 1.3
SUMO3-201ENST00000332859 KCNJ14Q9UNX9 436 aa23.16■■□□□ 1.3
SUMO3-201ENST00000332859 GOLGB1Q14789 3259 aaKnown RBP23.15■■□□□ 1.3
SUMO3-201ENST00000332859 KLRF2D3W0D1 207 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 TNFAIP1Q13829 316 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 ASPRV1Q53RT3 343 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 DIS3L2Q8IYB7 885 aaKnown RBP23.15■■□□□ 1.3
SUMO3-201ENST00000332859 BICD2Q8TD16 824 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 SPZ1Q9BXG8 430 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 FOXP1Q9H334 677 aaPredicted RBP23.15■■□□□ 1.3
SUMO3-201ENST00000332859 VPS54Q9P1Q0 977 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 NYAP2Q9P242 653 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 PDHBP11177 359 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 SMARCA1P28370 1054 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 USP17L2Q6R6M4 530 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 TMEM39BQ9GZU3 492 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 CLSTN2Q9H4D0 955 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 CABP5Q9NP86 173 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 DACT1Q9NYF0 836 aa23.15■■□□□ 1.3
SUMO3-201ENST00000332859 USP17L5A8MUK1 530 aa23.14■■□□□ 1.29
SUMO3-201ENST00000332859 TBC1D12O60347 775 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms