RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 STK36Q9NRP7 1315 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 PLEKHA8P1O95397 391 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 ASNSP08243 561 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 PDHBP11177 359 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 SYT1P21579 422 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 ATP2B2Q01814 1243 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 FUT2Q10981 343 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 NBPF11Q86T75 865 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 CMTR1Q8N1G2 835 aaKnown RBP14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 PHKBQ93100 1093 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 ORC3Q9UBD5 711 aaPredicted RBP14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 MAD2L2Q9UI95 211 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 ZNF112Q9UJU3 913 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 MTMR7Q9Y216 660 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 OTOFQ9HC10 1997 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 MYH6P13533 1939 aa14.06□□□□□ -0.16
TRIM49B-201ENST00000332682 PALM3A6NDB9 673 aaPredicted RBP14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 CTNND1O60716 968 aaKnown RBP14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 POTEIP0CG38 1075 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 POTEJP0CG39 1038 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 SNHG28P0DPA3 235 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 VEGFAP15692 232 aaPredicted RBP14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 INPP5BP32019 993 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 NUCB2P80303 420 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 STAG2Q8N3U4 1231 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 FAM184AQ8NB25 1140 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 GINM1Q9NU53 330 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 SYNPO2Q9UMS6 1093 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 FZD1Q9UP38 647 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 ZDHHC9Q9Y397 364 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 CNTNAP5Q8WYK1 1306 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 A0A1W2PRG0 241 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 USP17L5A8MUK1 530 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 STX6O43752 255 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 FMNL1O95466 1100 aaPredicted RBP14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 BRD1O95696 1058 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 PDCP20941 246 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 LARP1BQ659C4 914 aaKnown RBP14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 USP17L2Q6R6M4 530 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 USP48Q86UV5 1035 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 SRBD1Q8N5C6 995 aaKnown RBP14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 KLRG1Q96E93 195 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 CDCA5Q96FF9 252 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 WRNIP1Q96S55 665 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 SLC26A6Q9BXS9 759 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 RRAGCQ9HB90 399 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 KIF3AQ9Y496 699 aa14.05□□□□□ -0.16
TRIM49B-201ENST00000332682 BAZ2BQ9UIF8 2168 aaKnown RBP14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 UBE2Q2LH0YL09 131 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 PARP1P09874 1014 aaKnown RBP14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 GOLGA8HP0CJ92 632 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 ECE1P42892 770 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 GNAQP50148 359 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 SSRP1Q08945 709 aaKnown RBP14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 SLC35G1Q2M3R5 365 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 CDC37L1Q7L3B6 337 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 CCDC84Q86UT8 332 aaPredicted RBP14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 TRIM22Q8IYM9 498 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 SCYL3Q8IZE3 742 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 CCDC82Q8N4S0 544 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 GMCL1P1Q8NEA9 526 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 ACER1Q8TDN7 264 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 RNF26Q9BY78 433 aaPredicted RBP14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 GLIS2Q9BZE0 524 aaPredicted RBP14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 ARHGEF10LQ9HCE6 1279 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 NMRK2Q9NPI5 230 aa14.04□□□□□ -0.16
TRIM49B-201ENST00000332682 WDR33Q9C0J8 1336 aaKnown RBP14.03□□□□□ -0.16
TRIM49B-201ENST00000332682 PHIPQ8WWQ0 1821 aa14.03□□□□□ -0.16
TRIM49B-201ENST00000332682 ZNF543Q08ER8 600 aa14.03□□□□□ -0.16
TRIM49B-201ENST00000332682 ASPRV1Q53RT3 343 aa14.03□□□□□ -0.16
TRIM49B-201ENST00000332682 ZKSCAN4Q969J2 545 aaPredicted RBP14.03□□□□□ -0.16
TRIM49B-201ENST00000332682 MTMR6Q9Y217 621 aa14.03□□□□□ -0.16
TRIM49B-201ENST00000332682 TMX2Q9Y320 296 aa14.03□□□□□ -0.16
TRIM49B-201ENST00000332682 FRMPD2Q68DX3 1309 aaPredicted RBP14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 KLRF2D3W0D1 207 aa14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 F5H6K3 240 aa14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 USP2O75604 605 aaPredicted RBP14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 NDUFB10O96000 172 aa14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 PDIA4P13667 645 aaKnown RBP14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 KLRC3Q07444 240 aa14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 NOL9Q5SY16 702 aaKnown RBP14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 MAP1SQ66K74 1059 aaPredicted RBP14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 SLFN13Q68D06 897 aa14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 DCAF4Q8WV16 495 aa14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 GMCL1Q96IK5 515 aa14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 AIFM3Q96NN9 605 aa14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 LZTS2Q9BRK4 669 aa14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 CLEC11AQ9Y240 323 aa14.02□□□□□ -0.16
TRIM49B-201ENST00000332682 VPS37CA5D8V6 355 aaPredicted RBP14.01□□□□□ -0.17
TRIM49B-201ENST00000332682 PRPF3O43395 683 aaKnown RBP14.01□□□□□ -0.17
TRIM49B-201ENST00000332682 CYTH3O43739 400 aa14.01□□□□□ -0.17
TRIM49B-201ENST00000332682 DEXIO95424 95 aa14.01□□□□□ -0.17
TRIM49B-201ENST00000332682 PRKG1Q13976 671 aa14.01□□□□□ -0.17
TRIM49B-201ENST00000332682 GPATCH4Q5T3I0 446 aaKnown RBP14.01□□□□□ -0.17
TRIM49B-201ENST00000332682 LDHDQ86WU2 507 aa14.01□□□□□ -0.17
TRIM49B-201ENST00000332682 ZNF526Q8TF50 670 aaPredicted RBP14.01□□□□□ -0.17
TRIM49B-201ENST00000332682 ALG1Q9BT22 464 aa14.01□□□□□ -0.17
TRIM49B-201ENST00000332682 SPZ1Q9BXG8 430 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms