RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 TRMT1Q9NXH9 659 aaKnown RBP16.98■□□□□ 0.31
CLCNKA-201ENST00000331433 MTMR7Q9Y216 660 aa16.98■□□□□ 0.31
CLCNKA-201ENST00000331433 SARSP49591 514 aaKnown RBP16.98■□□□□ 0.31
CLCNKA-201ENST00000331433 GSTO1P78417 241 aa16.98■□□□□ 0.31
CLCNKA-201ENST00000331433 CRY2Q49AN0 593 aa16.98■□□□□ 0.31
CLCNKA-201ENST00000331433 NT5DC1Q5TFE4 455 aa16.98■□□□□ 0.31
CLCNKA-201ENST00000331433 CD209Q9NNX6 404 aa16.98■□□□□ 0.31
CLCNKA-201ENST00000331433 UBR3Q6ZT12 1888 aa16.98■□□□□ 0.31
CLCNKA-201ENST00000331433 KIF5BP33176 963 aa16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 FMR1Q06787 632 aaKnown RBP eCLIP16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 CFAP100Q494V2 611 aa16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 GPKOWQ92917 476 aaPredicted RBP eCLIP16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 RTFDC1Q9BY42 306 aaPredicted RBP16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 VWA3AA6NCI4 1184 aa16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 ONECUT3O60422 494 aaPredicted RBP16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 TSPY3P0CV98 308 aa16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 TSPY8P0CW00 308 aa16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 PPP4CP60510 307 aa16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 ST5P78524 1137 aa16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 PTGDRQ13258 359 aa16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 MORC3Q14149 939 aa16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 DGKHQ86XP1 1220 aa16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 NOL10Q9BSC4 688 aaKnown RBP16.97■□□□□ 0.31
CLCNKA-201ENST00000331433 CASP1P29466 404 aa16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 BTDP43251 543 aa16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 AFMP43652 599 aa16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 TRMT44Q8IYL2 757 aaKnown RBP16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 CCDC150Q8NCX0 1101 aa16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 GGA1Q9UJY5 639 aa16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 ROBO3Q96MS0 1386 aa16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 KANK3Q6NY19 840 aa16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 C15orf52Q6ZUT6 534 aaKnown RBP16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 AMOTL1Q8IY63 956 aa16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 CCAR2Q8N163 923 aaKnown RBP16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 ZNF592Q92610 1267 aa16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 FERMT2Q96AC1 680 aa16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 MORC2Q9Y6X9 1032 aaPredicted RBP16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 NAV1Q8NEY1 1877 aa16.96■□□□□ 0.31
CLCNKA-201ENST00000331433 TMEM232C9JQI7 657 aa16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 BMP15O95972 392 aa16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 LDHCP07864 332 aa16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 RBM17Q96I25 401 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 MCM7P33993 719 aa16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 ATP2C1P98194 919 aaPredicted RBP16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 ZNF710Q8N1W2 664 aa16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 MLKLQ8NB16 471 aa16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 SPATA20Q8TB22 786 aa16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 POLLQ9UGP5 575 aa16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 MAD2L2Q9UI95 211 aa16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 STX8Q9UNK0 236 aa16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 NFE2L3Q9Y4A8 694 aa16.95■□□□□ 0.3
CLCNKA-201ENST00000331433 FAM205AQ6ZU69 1335 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 CBFA2T2O43439 604 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 SLFN14P0C7P3 912 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 ATP2B4P23634 1241 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 DDR1Q08345 913 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 SLC35G1Q2M3R5 365 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 CEP135Q66GS9 1140 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 TYW1BQ6NUM6 668 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 RASGRP2Q7LDG7 609 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 ZNF444Q8N0Y2 327 aaPredicted RBP16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 RASGRP4Q8TDF6 673 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 PAGE5Q96GU1 130 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 MED15Q96RN5 788 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 PDCL3Q9H2J4 239 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 INTS13Q9NVM9 706 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 TRPC5Q9UL62 973 aaPredicted RBP16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 RASA1P20936 1047 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 GRM4Q14833 912 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 NYAP1Q6ZVC0 841 aa16.94■□□□□ 0.3
CLCNKA-201ENST00000331433 IL1R1P14778 569 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 GOLGA8FQ08AF8 430 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 GOLGA8DPQ0D2H9 430 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 PTPN14Q15678 1187 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 MFSD14BQ5SR56 506 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 E4F1Q66K89 784 aaPredicted RBP16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 TEX11Q8IYF3 940 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 TRIML1Q8N9V2 468 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 ANKS1AQ92625 1134 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 IL17AQ16552 155 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 VSTM4Q8IW00 320 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 TBC1D16Q8TBP0 767 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 STAMQ92783 540 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 TMEM47Q9BQJ4 181 aa16.93■□□□□ 0.3
CLCNKA-201ENST00000331433 CYTH3O43739 400 aa16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 GOLGA8HP0CJ92 632 aa16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 SH3RF1Q7Z6J0 888 aa16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 BLIDQ8IZY5 108 aa16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 ENOX1Q8TC92 643 aaKnown RBP16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 DACH1Q9UI36 760 aa16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 GPR75-ASB3A0A0A6YYF3 556 aa16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 C6orf229H3BNL8 230 aa16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 IGSF3O75054 1194 aa16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 ZNF18P17022 549 aa16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 TRAPPC10P48553 1259 aa16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 CPVLQ9H3G5 476 aa16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 SAMSN1Q9NSI8 373 aaKnown RBP16.92■□□□□ 0.3
CLCNKA-201ENST00000331433 FLT1P17948 1338 aa16.91■□□□□ 0.3
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