RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 ANTXR2P58335 489 aa20.48■□□□□ 0.87
SOCS3-201ENST00000330871 TSEN2Q8NCE0 465 aaKnown RBP20.48■□□□□ 0.87
SOCS3-201ENST00000330871 OSBP2Q969R2 916 aa20.48■□□□□ 0.87
SOCS3-201ENST00000330871 AIDAQ96BJ3 306 aa20.48■□□□□ 0.87
SOCS3-201ENST00000330871 VPS16Q9H269 839 aa20.48■□□□□ 0.87
SOCS3-201ENST00000330871 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.48■□□□□ 0.87
SOCS3-201ENST00000330871 KRT9P35527 623 aa20.48■□□□□ 0.87
SOCS3-201ENST00000330871 AFMP43652 599 aa20.48■□□□□ 0.87
SOCS3-201ENST00000330871 GUCY1A3Q02108 690 aa20.48■□□□□ 0.87
SOCS3-201ENST00000330871 SF3B2Q13435 895 aaKnown RBP20.48■□□□□ 0.87
SOCS3-201ENST00000330871 CCDC13Q8IYE1 715 aa20.48■□□□□ 0.87
SOCS3-201ENST00000330871 PSMD14O00487 310 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 HSP90AB3PQ58FF7 597 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 CCDC122Q5T0U0 273 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 NAA35Q5VZE5 725 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 TEX11Q8IYF3 940 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 CCDC51Q96ER9 411 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 DDX20Q9UHI6 824 aaKnown RBP20.47■□□□□ 0.87
SOCS3-201ENST00000330871 EPN1Q9Y6I3 576 aaPredicted RBP20.47■□□□□ 0.87
SOCS3-201ENST00000330871 AFDNP55196 1824 aaKnown RBP20.47■□□□□ 0.87
SOCS3-201ENST00000330871 ERCC5P28715 1186 aaPredicted RBP20.47■□□□□ 0.87
SOCS3-201ENST00000330871 SLC7A5Q01650 507 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 IFT88Q13099 833 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 SLC40A1Q9NP59 571 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 DMGDHQ9UI17 866 aaKnown RBP20.47■□□□□ 0.87
SOCS3-201ENST00000330871 DENND2AQ9ULE3 1009 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 N4BP3O15049 544 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 SKAP2O75563 359 aaPredicted RBP20.47■□□□□ 0.87
SOCS3-201ENST00000330871 NDUFA10O95299 355 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 TATP17735 454 aaPredicted RBP20.47■□□□□ 0.87
SOCS3-201ENST00000330871 FECHP22830 423 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 SEC24CP53992 1094 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 NAP1L1P55209 391 aaKnown RBP20.47■□□□□ 0.87
SOCS3-201ENST00000330871 BIRC2Q13490 618 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 E2F5Q15329 346 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.47■□□□□ 0.87
SOCS3-201ENST00000330871 RUFY1Q96T51 708 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 VCPKMTQ9H867 229 aa20.47■□□□□ 0.87
SOCS3-201ENST00000330871 EYA2O00167 538 aa20.46■□□□□ 0.87
SOCS3-201ENST00000330871 WLSQ5T9L3 541 aa20.46■□□□□ 0.87
SOCS3-201ENST00000330871 IFNL2Q8IZJ0 200 aa20.46■□□□□ 0.87
SOCS3-201ENST00000330871 ORAI2Q96SN7 254 aa20.46■□□□□ 0.87
SOCS3-201ENST00000330871 RASSF9O75901 435 aa20.46■□□□□ 0.87
SOCS3-201ENST00000330871 MATR3P43243 847 aaKnown RBP eCLIP20.46■□□□□ 0.87
SOCS3-201ENST00000330871 SMTNP53814 917 aa20.46■□□□□ 0.87
SOCS3-201ENST00000330871 CLNS1AP54105 237 aaKnown RBP20.46■□□□□ 0.87
SOCS3-201ENST00000330871 APBA1Q02410 837 aa20.46■□□□□ 0.87
SOCS3-201ENST00000330871 PPARAQ07869 468 aa20.46■□□□□ 0.87
SOCS3-201ENST00000330871 MB21D2Q8IYB1 491 aaPredicted RBP20.46■□□□□ 0.87
SOCS3-201ENST00000330871 TMEM94Q12767 1356 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 OPA1O60313 960 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 KRT14P02533 472 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 SKOR1P84550 965 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 CKAP4Q07065 602 aaKnown RBP20.45■□□□□ 0.86
SOCS3-201ENST00000330871 CDKAL1Q5VV42 579 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 PAPD7Q5XG87 772 aaKnown RBP20.45■□□□□ 0.86
SOCS3-201ENST00000330871 RNPC3Q96LT9 517 aaKnown RBP20.45■□□□□ 0.86
SOCS3-201ENST00000330871 SCLT1Q96NL6 688 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 JADE2Q9NQC1 790 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 BCCIPQ9P287 314 aaKnown RBP eCLIP20.45■□□□□ 0.86
SOCS3-201ENST00000330871 ATXN2Q99700 1313 aaKnown RBP20.45■□□□□ 0.86
SOCS3-201ENST00000330871 FGAP02671 866 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 LSP1P33241 339 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 LRRC24Q50LG9 513 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 NCOA7Q8NI08 942 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 CTAGE1Q96RT6 745 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 LRRC1Q9BTT6 524 aa20.45■□□□□ 0.86
SOCS3-201ENST00000330871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.45■□□□□ 0.86
SOCS3-201ENST00000330871 SCN11AQ9UI33 1791 aa20.44■□□□□ 0.86
SOCS3-201ENST00000330871 CDR1P51861 262 aa20.44■□□□□ 0.86
SOCS3-201ENST00000330871 HDLBPQ00341 1268 aaKnown RBP20.44■□□□□ 0.86
SOCS3-201ENST00000330871 FKBP4Q02790 459 aaKnown RBP eCLIP20.44■□□□□ 0.86
SOCS3-201ENST00000330871 TRIML1Q8N9V2 468 aa20.44■□□□□ 0.86
SOCS3-201ENST00000330871 ZNF473Q8WTR7 871 aaKnown RBP20.44■□□□□ 0.86
SOCS3-201ENST00000330871 TBC1D22AQ8WUA7 517 aa20.44■□□□□ 0.86
SOCS3-201ENST00000330871 NLRP2Q9NX02 1062 aa20.44■□□□□ 0.86
SOCS3-201ENST00000330871 TAB2Q9NYJ8 693 aa20.44■□□□□ 0.86
SOCS3-201ENST00000330871 ACTN4O43707 911 aaKnown RBP20.44■□□□□ 0.86
SOCS3-201ENST00000330871 ZFYP08048 801 aaPredicted RBP20.44■□□□□ 0.86
SOCS3-201ENST00000330871 CUL4BQ13620 913 aa20.44■□□□□ 0.86
SOCS3-201ENST00000330871 KRT31Q15323 416 aa20.44■□□□□ 0.86
SOCS3-201ENST00000330871 WASHC4Q2M389 1173 aa20.44■□□□□ 0.86
SOCS3-201ENST00000330871 RALYLQ86SE5 291 aaKnown RBP20.44■□□□□ 0.86
SOCS3-201ENST00000330871 NKX2-3Q8TAU0 364 aa20.44■□□□□ 0.86
SOCS3-201ENST00000330871 RPSAP08865 295 aaKnown RBP20.43■□□□□ 0.86
SOCS3-201ENST00000330871 HERVK_113P62684 666 aa20.43■□□□□ 0.86
SOCS3-201ENST00000330871 NNTQ13423 1086 aa20.43■□□□□ 0.86
SOCS3-201ENST00000330871 MICALCLQ6ZW33 695 aa20.43■□□□□ 0.86
SOCS3-201ENST00000330871 TRIM6Q9C030 488 aaPredicted RBP20.43■□□□□ 0.86
SOCS3-201ENST00000330871 CWC25Q9NXE8 425 aaPredicted RBP20.43■□□□□ 0.86
SOCS3-201ENST00000330871 FBXO2Q9UK22 296 aaPredicted RBP20.43■□□□□ 0.86
SOCS3-201ENST00000330871 METAP2P50579 478 aaKnown RBP eCLIP20.43■□□□□ 0.86
SOCS3-201ENST00000330871 FAM228AQ86W67 206 aa20.43■□□□□ 0.86
SOCS3-201ENST00000330871 MICU3Q86XE3 530 aa20.43■□□□□ 0.86
SOCS3-201ENST00000330871 CEP120Q8N960 986 aa20.43■□□□□ 0.86
SOCS3-201ENST00000330871 DCAF5Q96JK2 942 aa20.43■□□□□ 0.86
SOCS3-201ENST00000330871 HAUS4Q9H6D7 363 aa20.43■□□□□ 0.86
SOCS3-201ENST00000330871 FOXP2O15409 715 aa20.42■□□□□ 0.86
SOCS3-201ENST00000330871 TOB1P50616 345 aaPredicted RBP20.42■□□□□ 0.86
SOCS3-201ENST00000330871 DPYDQ12882 1025 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms