RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 TMEM199Q8N511 208 aa18.36■□□□□ 0.53
CTHRC1-201ENST00000330295 GINM1Q9NU53 330 aa18.36■□□□□ 0.53
CTHRC1-201ENST00000330295 PI4KBQ9UBF8 816 aa18.36■□□□□ 0.53
CTHRC1-201ENST00000330295 EYA2O00167 538 aa18.35■□□□□ 0.53
CTHRC1-201ENST00000330295 GTPBP6O43824 516 aaPredicted RBP18.35■□□□□ 0.53
CTHRC1-201ENST00000330295 MAP4K4O95819 1239 aaPredicted RBP18.35■□□□□ 0.53
CTHRC1-201ENST00000330295 C12orf42Q96LP6 360 aa18.35■□□□□ 0.53
CTHRC1-201ENST00000330295 MTIF3Q9H2K0 278 aaKnown RBP18.35■□□□□ 0.53
CTHRC1-201ENST00000330295 STARD7Q9NQZ5 370 aa18.35■□□□□ 0.53
CTHRC1-201ENST00000330295 ZBTB21Q9ULJ3 1066 aa18.35■□□□□ 0.53
CTHRC1-201ENST00000330295 TRANK1O15050 2925 aa18.34■□□□□ 0.53
CTHRC1-201ENST00000330295 APBB1O00213 710 aa18.34■□□□□ 0.53
CTHRC1-201ENST00000330295 ZBTB22O15209 634 aa18.34■□□□□ 0.53
CTHRC1-201ENST00000330295 STRNO43815 780 aa18.34■□□□□ 0.53
CTHRC1-201ENST00000330295 COBLO75128 1261 aa18.34■□□□□ 0.53
CTHRC1-201ENST00000330295 VAMP4O75379 141 aa18.34■□□□□ 0.53
CTHRC1-201ENST00000330295 GDF11O95390 407 aa18.34■□□□□ 0.53
CTHRC1-201ENST00000330295 ATP2B3Q16720 1220 aa18.34■□□□□ 0.53
CTHRC1-201ENST00000330295 SPTY2D1Q68D10 685 aaPredicted RBP18.34■□□□□ 0.53
CTHRC1-201ENST00000330295 CATSPERGQ6ZRH7 1159 aa18.34■□□□□ 0.53
CTHRC1-201ENST00000330295 HLA-CQ95604 372 aa18.34■□□□□ 0.53
CTHRC1-201ENST00000330295 MECOMQ03112 1051 aa18.33■□□□□ 0.52
CTHRC1-201ENST00000330295 ZNF384Q8TF68 577 aa18.33■□□□□ 0.52
CTHRC1-201ENST00000330295 DNAJC18Q9H819 358 aa18.33■□□□□ 0.52
CTHRC1-201ENST00000330295 SLC5A4Q9NY91 659 aa18.33■□□□□ 0.52
CTHRC1-201ENST00000330295 MROH7Q68CQ1 1323 aa18.32■□□□□ 0.52
CTHRC1-201ENST00000330295 ACLYP53396 1101 aa18.32■□□□□ 0.52
CTHRC1-201ENST00000330295 RABGGTBP53611 331 aa18.32■□□□□ 0.52
CTHRC1-201ENST00000330295 ZYXQ15942 572 aaKnown RBP18.32■□□□□ 0.52
CTHRC1-201ENST00000330295 CSPP1Q1MSJ5 1256 aa18.32■□□□□ 0.52
CTHRC1-201ENST00000330295 NUP133Q8WUM0 1156 aa18.32■□□□□ 0.52
CTHRC1-201ENST00000330295 TSEN34Q9BSV6 310 aaKnown RBP18.32■□□□□ 0.52
CTHRC1-201ENST00000330295 IL23AQ9NPF7 189 aa18.32■□□□□ 0.52
CTHRC1-201ENST00000330295 ZDBF2Q9HCK1 2354 aa18.32■□□□□ 0.52
CTHRC1-201ENST00000330295 WDFY4Q6ZS81 3184 aa18.32■□□□□ 0.52
CTHRC1-201ENST00000330295 BRWD1Q9NSI6 2320 aa18.31■□□□□ 0.52
CTHRC1-201ENST00000330295 SPDYE16A6NNV3 312 aaPredicted RBP18.31■□□□□ 0.52
CTHRC1-201ENST00000330295 RFXAPO00287 272 aa18.31■□□□□ 0.52
CTHRC1-201ENST00000330295 FOXK2Q01167 660 aa18.31■□□□□ 0.52
CTHRC1-201ENST00000330295 RASGRF1Q13972 1273 aa18.31■□□□□ 0.52
CTHRC1-201ENST00000330295 ATG9AQ7Z3C6 839 aa18.31■□□□□ 0.52
CTHRC1-201ENST00000330295 MAML3Q96JK9 1138 aa18.31■□□□□ 0.52
CTHRC1-201ENST00000330295 MOV10L1Q9BXT6 1211 aaKnown RBP18.31■□□□□ 0.52
CTHRC1-201ENST00000330295 PPP1R12CQ9BZL4 782 aa18.31■□□□□ 0.52
CTHRC1-201ENST00000330295 DHX36Q9H2U1 1008 aaKnown RBP18.31■□□□□ 0.52
CTHRC1-201ENST00000330295 NRBP1Q9UHY1 535 aa18.31■□□□□ 0.52
CTHRC1-201ENST00000330295 ROBO3Q96MS0 1386 aa18.3■□□□□ 0.52
CTHRC1-201ENST00000330295 PDS5AQ29RF7 1337 aaKnown RBP18.3■□□□□ 0.52
CTHRC1-201ENST00000330295 FGBP02675 491 aa18.3■□□□□ 0.52
CTHRC1-201ENST00000330295 MYOGP15173 224 aa18.3■□□□□ 0.52
CTHRC1-201ENST00000330295 CCDC102BQ68D86 513 aa18.3■□□□□ 0.52
CTHRC1-201ENST00000330295 ERICH6Q7L0X2 663 aa18.3■□□□□ 0.52
CTHRC1-201ENST00000330295 TEX11Q8IYF3 940 aa18.3■□□□□ 0.52
CTHRC1-201ENST00000330295 FEZ1Q99689 392 aa18.3■□□□□ 0.52
CTHRC1-201ENST00000330295 PCDHA11Q9Y5I1 949 aa18.3■□□□□ 0.52
CTHRC1-201ENST00000330295 A0A0G2JMZ2 1700 aa18.29■□□□□ 0.52
CTHRC1-201ENST00000330295 ADAMTS4O75173 837 aa18.29■□□□□ 0.52
CTHRC1-201ENST00000330295 VCAM1P19320 739 aa18.29■□□□□ 0.52
CTHRC1-201ENST00000330295 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
CTHRC1-201ENST00000330295 KRT40Q6A162 431 aa18.29■□□□□ 0.52
CTHRC1-201ENST00000330295 OTOP2Q7RTS6 562 aa18.29■□□□□ 0.52
CTHRC1-201ENST00000330295 METTL16Q86W50 562 aaKnown RBP18.29■□□□□ 0.52
CTHRC1-201ENST00000330295 CRACR2BQ8N4Y2 399 aaPredicted RBP18.29■□□□□ 0.52
CTHRC1-201ENST00000330295 TRIM34Q9BYJ4 488 aa18.29■□□□□ 0.52
CTHRC1-201ENST00000330295 ZNF318Q5VUA4 2279 aa18.29■□□□□ 0.52
CTHRC1-201ENST00000330295 MOXD2PA6NHM9 499 aa18.28■□□□□ 0.52
CTHRC1-201ENST00000330295 ST18O60284 1047 aa18.28■□□□□ 0.52
CTHRC1-201ENST00000330295 LDHCP07864 332 aa18.28■□□□□ 0.52
CTHRC1-201ENST00000330295 ALADP13716 330 aa18.28■□□□□ 0.52
CTHRC1-201ENST00000330295 ERCC3P19447 782 aa18.28■□□□□ 0.52
CTHRC1-201ENST00000330295 CDK7P50613 346 aa18.28■□□□□ 0.52
CTHRC1-201ENST00000330295 FOXP4Q8IVH2 680 aaPredicted RBP18.28■□□□□ 0.52
CTHRC1-201ENST00000330295 GJD3Q8N144 294 aa18.28■□□□□ 0.52
CTHRC1-201ENST00000330295 SHCBP1Q8NEM2 672 aa18.28■□□□□ 0.52
CTHRC1-201ENST00000330295 MRS2Q9HD23 443 aa18.28■□□□□ 0.52
CTHRC1-201ENST00000330295 FANCIQ9NVI1 1328 aa18.27■□□□□ 0.52
CTHRC1-201ENST00000330295 ADORA1P30542 326 aa18.27■□□□□ 0.52
CTHRC1-201ENST00000330295 CYP2C18P33260 490 aa18.27■□□□□ 0.52
CTHRC1-201ENST00000330295 USP14P54578 494 aa18.27■□□□□ 0.52
CTHRC1-201ENST00000330295 GSTO1P78417 241 aa18.27■□□□□ 0.52
CTHRC1-201ENST00000330295 LENG1Q96BZ8 264 aaPredicted RBP18.27■□□□□ 0.52
CTHRC1-201ENST00000330295 SPATC1LQ9H0A9 340 aa18.27■□□□□ 0.52
CTHRC1-201ENST00000330295 CEP126Q9P2H0 1117 aa18.27■□□□□ 0.52
CTHRC1-201ENST00000330295 IL16Q14005 1332 aa18.26■□□□□ 0.51
CTHRC1-201ENST00000330295 GH2P01242 217 aa18.26■□□□□ 0.51
CTHRC1-201ENST00000330295 AKR1A1P14550 325 aa18.26■□□□□ 0.51
CTHRC1-201ENST00000330295 CCDC27Q2M243 656 aa18.26■□□□□ 0.51
CTHRC1-201ENST00000330295 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
CTHRC1-201ENST00000330295 ABRAQ8N0Z2 381 aa18.26■□□□□ 0.51
CTHRC1-201ENST00000330295 NSUN4Q96CB9 384 aaKnown RBP18.26■□□□□ 0.51
CTHRC1-201ENST00000330295 PHOX2BQ99453 314 aa18.26■□□□□ 0.51
CTHRC1-201ENST00000330295 KIAA1683Q9H0B3 1180 aa18.26■□□□□ 0.51
CTHRC1-201ENST00000330295 RPAP3Q9H6T3 665 aaPredicted RBP18.26■□□□□ 0.51
CTHRC1-201ENST00000330295 SLC4A7Q9Y6M7 1214 aa18.26■□□□□ 0.51
CTHRC1-201ENST00000330295 ELP1O95163 1332 aa18.25■□□□□ 0.51
CTHRC1-201ENST00000330295 SYNRGQ9UMZ2 1314 aa18.25■□□□□ 0.51
CTHRC1-201ENST00000330295 EPOPA6NHQ4 379 aa18.25■□□□□ 0.51
CTHRC1-201ENST00000330295 TAL1P17542 331 aaPredicted RBP18.25■□□□□ 0.51
CTHRC1-201ENST00000330295 KCNA10Q16322 511 aa18.25■□□□□ 0.51
CTHRC1-201ENST00000330295 FAM178BQ8IXR5 827 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms